PGSC0003DMG402030621 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG402030621 T043533_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.848 0.551
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.848 0.551
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.848 0.551
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.848 0.531
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.848 0.531
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400078696 bHLH 165 213

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc02g091800.2 Solanum lycopersicum Solyc02g091800.2 I 0.884
MTR_5g030430 Medicago truncatula MTR_5g030430 I 0.848
ATMYC2 Arabidopsis lyrata scaffold_103634.1 I 0.848
Solyc08g076930.1 Solanum lycopersicum Solyc08g076930.1 I 0.848
gene10501-v1.0-hybrid Fragaria vesca gene10501-v1.0-hybrid I 0.848
Carubv10028441m.g Capsella rubella Carubv10028441m.g I 0.848
Gorai.003G182100 Gossypium raimondii Gorai.003G182100 I 0.848
Carubv10008586m.g Capsella rubella Carubv10008586m.g I 0.848
SapurV1A.0151s0080 Salix purpurea SapurV1A.0151s0080 I 0.848
MDP0000136498 Malus domestica MDP0000136498 I 0.848
MDP0000029168 Malus domestica MDP0000029168 I 0.848
PGSC0003DMG400001161 Solanum tuberosum PGSC0003DMG400001161 I 0.848
POPTR_0003s09090 Populus trichocarpa POPTR_0003s09090 I 0.848
Carubv10004392m.g Capsella rubella Carubv10004392m.g I 0.848
Pm023237 Prunus mume Pm023237 I 0.848
mgf002775m Mimulus guttatus mgf002775m I 0.848
Ca_12352 Cicer arietinum Ca_12352 I 0.848
MYC2 Arabidopsis thaliana AT1G32640 D 0.848
Ca_11514 Cicer arietinum Ca_11514 I 0.848
Bostr.28243s0060 Boechera stricta Bostr.28243s0060 I 0.848
Bostr.30275s0255 Boechera stricta Bostr.30275s0255 I 0.848
Cagra.7865s0024 Capsella grandiflora Cagra.7865s0024 I 0.848
Cagra.3356s0080 Capsella grandiflora Cagra.3356s0080 I 0.848
Cagra.0751s0023 Capsella grandiflora Cagra.0751s0023 I 0.848
Bostr.3359s0090 Boechera stricta Bostr.3359s0090 I 0.848
GLYMA09G33730 Glycine max GLYMA09G33730 I 0.848
PGSC0003DMG400017535 Solanum tuberosum PGSC0003DMG400017535 I 0.848
Bo1g017990 Brassica oleracea Bo1g017990 I 0.848
Bo01130s010 Brassica oleracea Bo01130s010 I 0.848
Bo5g086990 Brassica oleracea Bo5g086990 I 0.848
Bo7g075710 Brassica oleracea Bo7g075710 I 0.848
GLYMA08G36720 Glycine max GLYMA08G36720 I 0.848
Thhalv10007075m.g Eutrema salsugineum Thhalv10007075m.g I 0.848
Thhalv10024688m.g Eutrema salsugineum Thhalv10024688m.g I 0.848
MYC3 Arabidopsis thaliana AT5G46760 D 0.848
MYC4 Arabidopsis thaliana AT4G17880 D 0.848
scaffold_800152.1 Arabidopsis lyrata scaffold_800152.1 I 0.848
chr2.CM0177.830.nc Lotus japonicus chr2.CM0177.830.nc I 0.848
PK18474.1 Cannabis sativa PK18474.1 D 0.848
Bo9g065530 Brassica oleracea Bo9g065530 I 0.848
Bo8g028850 Brassica oleracea Bo8g028850 I 0.848
Bra010178 Brassica rapa Bra010178 I 0.848
PRUPE_ppa002404mg Prunus persica PRUPE_ppa002404mg I 0.848
fgenesh2_kg.7__2520__AT4G17880.1 Arabidopsis lyrata fgenesh2_kg.7__2520__AT4G17880.1 I 0.848
GLYMA01G02251 Glycine max GLYMA01G02251 I 0.848
GLYMA01G12740 Glycine max GLYMA01G12740 I 0.848
Thhalv10000808m.g Eutrema salsugineum Thhalv10000808m.g I 0.848
Bra013263 Brassica rapa Bra013263 I 0.848
Bra024998 Brassica rapa Bra024998 I 0.848
Bra017523 Brassica rapa Bra017523 I 0.848
Bra017527 Brassica rapa Bra017527 I 0.848
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.845
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.845
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.845
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.845
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I 0.845
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.845
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.845
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.845
MTR_4g098035 Medicago truncatula MTR_4g098035 I 0.844
Gorai.004G184800 Gossypium raimondii Gorai.004G184800 I 0.844
GLYMA17G16720 Glycine max GLYMA17G16720 I 0.844
GLYMA05G23530 Glycine max GLYMA05G23530 I 0.844
MTR_0246s0050 Medicago truncatula MTR_0246s0050 I 0.844
MTR_0246s0020 Medicago truncatula MTR_0246s0020 I 0.844
MTR_8g067280 Medicago truncatula MTR_8g067280 I 0.844
Ca_09378 Cicer arietinum Ca_09378 I 0.843
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.843
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I 0.843
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N 0.843
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.843
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.843
Si012401m.g Setaria italica Si012401m.g I 0.843
Si000845m.g Setaria italica Si000845m.g I 0.843
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.843
MTR_4g097950 Medicago truncatula MTR_4g097950 I 0.843
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.843
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.843
OB01G30110 Oryza brachyantha OB01G30110 N 0.843
OB04G28350 Oryza brachyantha OB04G28350 N 0.843
OBART01G20350 Oryza barthii OBART01G20350 N 0.843
OB04G28390 Oryza brachyantha OB04G28390 N 0.843
OB04G28380 Oryza brachyantha OB04G28380 N 0.843
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N 0.843
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.843
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.843
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.843
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.843
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.843
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.843
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.843
F775_10624 Aegilops tauschii F775_10624 N 0.843
OBART04G21320 Oryza barthii OBART04G21320 N 0.843
OBART04G21370 Oryza barthii OBART04G21370 N 0.843
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.843
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.843
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.843
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.843
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.843
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.843
OS04G0557200 Oryza sativa OS04G0557200 N 0.843
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.843
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.843
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.843
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.843
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.843
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.843
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.843
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.843
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.843
OMERI01G18860 Oryza meridionalis OMERI01G18860 N 0.843
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.843