RGE1 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0001s31250 T043756_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s31250.1 bHLH 24 73

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00017p00226990 Amborella trichopoda AMTR_s00017p00226990 N 0.903
SapurV1A.0643s0100 Salix purpurea SapurV1A.0643s0100 N 0.903
SapurV1A.0005s1150 Salix purpurea SapurV1A.0005s1150 N 0.903
Pm021290 Prunus mume Pm021290 N 0.883
PRUPE_ppa022683mg Prunus persica PRUPE_ppa022683mg N 0.883
TCM_007083 Theobroma cacao TCM_007083 N 0.883
TCM_033803 Theobroma cacao TCM_033803 N 0.883
RGE1 Vitis vinifera VIT_03s0063g00170 N 0.883
VIT_18s0001g10300 Vitis vinifera VIT_18s0001g10300 N 0.883
29801.m003163 Ricinus communis 29801.m003163 N 0.883
cassava47360.m1 Manihot esculenta cassava47360.m1 N 0.883
cassava46929.m1 Manihot esculenta cassava46929.m1 N 0.883
GSMUA_Achr9G08780_001 Musa acuminata GSMUA_Achr9G08780_001 N 0.883
Gorai.002G135000 Gossypium raimondii Gorai.002G135000 N 0.883
30170.m013700 Ricinus communis 30170.m013700 N 0.879
Solyc01g057300.1 Solanum lycopersicum Solyc01g057300.1 N 0.867
PGSC0003DMG400025780 Solanum tuberosum PGSC0003DMG400025780 N 0.867
PGSC0003DMG400025783 Solanum tuberosum PGSC0003DMG400025783 N 0.867
Solyc01g107950.1 Solanum lycopersicum Solyc01g107950.1 N 0.867
Ca_06466 Cicer arietinum Ca_06466 N 0.861
gene24577-v1.0-hybrid Fragaria vesca gene24577-v1.0-hybrid N 0.859
Carubv10011964m.g Capsella rubella Carubv10011964m.g N 0.859
Thhalv10012185m.g Eutrema salsugineum Thhalv10012185m.g N 0.859
Bo6g018390 Brassica oleracea Bo6g018390 N 0.859
Bo5g076460 Brassica oleracea Bo5g076460 N 0.859
BHLH95 Arabidopsis thaliana AT1G49770 N 0.859
Pavir.J18412 Panicum virgatum Pavir.J18412 N 0.859
MDP0000484847 Malus domestica MDP0000484847 N 0.859
Bostr.26675s0191 Boechera stricta Bostr.26675s0191 N 0.859
Cagra.2481s0020 Capsella grandiflora Cagra.2481s0020 N 0.859
PRUPE_ppa018148mg Prunus persica PRUPE_ppa018148mg N 0.859
RGE1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003696 N 0.859
Bra040671 Brassica rapa Bra040671 N 0.859
Bra018796 Brassica rapa Bra018796 N 0.859
POPTR_0014s02600 Populus trichocarpa POPTR_0014s02600 N 0.856
SapurV1A.0423s0120 Salix purpurea SapurV1A.0423s0120 N 0.856
orange1.1g037241m.g Citrus sinensis orange1.1g037241m.g N 0.856
Ciclev10030106m.g Citrus clementina Ciclev10030106m.g N 0.856
PGSC0003DMG400025781 Solanum tuberosum PGSC0003DMG400025781 N 0.855
Ciclev10003973m.g Citrus clementina Ciclev10003973m.g N 0.852
orange1.1g038084m.g Citrus sinensis orange1.1g038084m.g N 0.852
Aquca_007_00701 Aquilegia coerulea Aquca_007_00701 N 0.847
Pm005302 Prunus mume Pm005302 N 0.846
Ca_16375 Cicer arietinum Ca_16375 N 0.841
Solyc01g107960.2 Solanum lycopersicum Solyc01g107960.2 N 0.841
Lus10024812.g Linum usitatissimum Lus10024812.g N 0.841