POPTR_0003s12810 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0003s12810 T043783_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK03576.1
M01119_2.00
Cannabis sativa
NCACGTGCN

NGCACGTGN
PBM
Lambert et al.(2019)
pTH10095
0.843 0.694
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s12810.1 bHLH 426 474

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0612s0160 Salix purpurea SapurV1A.0612s0160 N 0.890
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.881
Pm023805 Prunus mume Pm023805 I 0.881
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.881
GL3 Arabidopsis thaliana AT5G41315 I 0.879
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.879
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.879
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.879
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.879
Bra025508 Brassica rapa Bra025508 I 0.879
Bo4g141990 Brassica oleracea Bo4g141990 I 0.879
cassava8594.m1 Manihot esculenta cassava8594.m1 I 0.873
TCM_016261 Theobroma cacao TCM_016261 I 0.868
mgf005803m Mimulus guttatus mgf005803m I 0.859
LjSGA_008146.1 Lotus japonicus LjSGA_008146.1 I 0.857
GLYMA05G37770 Glycine max GLYMA05G37770 N 0.857
GLYMA08G01810 Glycine max GLYMA08G01810 I 0.857
MTR_8g098275 Medicago truncatula MTR_8g098275 I 0.857
Ca_05750 Cicer arietinum Ca_05750 I 0.857
Bra027653 Brassica rapa Bra027653 N 0.855
Thhalv10023356m.g Eutrema salsugineum Thhalv10023356m.g N 0.855
Carubv10019965m.g Capsella rubella Carubv10019965m.g N 0.855
Bo9g029230 Brassica oleracea Bo9g029230 N 0.855
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.855
BHLH2 Arabidopsis thaliana AT1G63650 N 0.855
Bra027796 Brassica rapa Bra027796 N 0.855
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.855
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.855
Sb06g016380 Sorghum bicolor Sb06g016380 N 0.845
VIT_02s0025g03450 Vitis vinifera VIT_02s0025g03450 N 0.844
PK03576.1 Cannabis sativa PK03576.1 D 0.843
Gorai.007G023500 Gossypium raimondii Gorai.007G023500 N 0.838