POPTR_0004s17540 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0004s17540 T043797_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.914 0.902
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s17540.1 bHLH 42 92
POPTR_0004s17540.2 bHLH 42 92
POPTR_0004s17540.3 bHLH 42 92
POPTR_0004s17540.4 bHLH 42 92
POPTR_0004s17540.5 bHLH 42 92

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

Invalid Input OrderBy

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action