CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0006s03590
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0006s03590
T043819_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0006s03590.1
bHLH
3
55
KKLNHNASERDRRKKINSLYSSLRSLLPASDGMKKLSIPSTISRVLKYIPELQ
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0196s0420
Salix purpurea
SapurV1A.0196s0420
N
0.886
VIT_08s0007g05300
Vitis vinifera
VIT_08s0007g05300
N
0.861
POPTR_0006s03560
Populus trichocarpa
POPTR_0006s03560
N
0.860
Solyc10g079660.1
Solanum lycopersicum
Solyc10g079660.1
N
0.856
Bostr.20505s0056
Boechera stricta
Bostr.20505s0056
N
0.848
Cagra.0578s0028
Capsella grandiflora
Cagra.0578s0028
N
0.848
Carubv10019130m.g
Capsella rubella
Carubv10019130m.g
N
0.848
Carubv10017770m.g
Capsella rubella
Carubv10017770m.g
N
0.848
Bostr.20505s0055
Boechera stricta
Bostr.20505s0055
N
0.848
Cagra.0578s0027
Capsella grandiflora
Cagra.0578s0027
N
0.848
Bo01495s010
Brassica oleracea
Bo01495s010
N
0.848
Bo4g112590
Brassica oleracea
Bo4g112590
N
0.848
Bra014654
Brassica rapa
Bra014654
N
0.848
Bra014657
Brassica rapa
Bra014657
N
0.848
BHLH039
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001751
N
0.848
Bra014658
Brassica rapa
Bra014658
N
0.848
Thhalv10006189m.g
Eutrema salsugineum
Thhalv10006189m.g
N
0.845
Thhalv10006191m.g
Eutrema salsugineum
Thhalv10006191m.g
N
0.845
MDP0000641681
Malus domestica
MDP0000641681
N
0.840
27751.m000169
Ricinus communis
27751.m000169
N
0.839