POPTR_0012s05210 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0012s05210 T043874_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.853 0.804
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.853 0.784
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.853 0.784
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.853 0.784
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.853 0.784
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.853 0.765
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s05210.1 bHLH 163 213

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

343 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSCSAG00000006974 Chlorocebus sabaeus ENSCSAG00000006974 I 0.000
ENSDNOG00000049583 Dasypus novemcinctus ENSDNOG00000049583 I 0.000
ENSMPUG00000004860 Mustela putorius furo ENSMPUG00000004860 I 0.000
ENSOARG00000008348 Ovis aries ENSOARG00000008348 I 0.000
ENSP00000378882 Macaca fascicularis ENSP00000378882 I 0.000
ENSP00000378882-D1 Bos grunniens ENSP00000378882-D1 I 0.000
ENSPANG00000025098 Papio anubis ENSPANG00000025098 I 0.000
ENSPPYG00000019350 Pongo abelii ENSPPYG00000019350 I 0.000
ENSPTRG00000021118 Pan troglodytes ENSPTRG00000021118 I 0.000
ENSTSYG00000009571 Tarsius syrichta ENSTSYG00000009571 I 0.000
ZNF484 Tupaia belangeri ENSTBEG00000005945 N 0.000
ZNF484 Homo sapiens ENSG00000127081 D 0.000
ZNF484 Callithrix jacchus ENSCJAG00000005536 I 0.000
ZNF484 Macaca mulatta ENSMMUG00000002396 I 0.000
ZNF484 Gorilla gorilla ENSGGOG00000014338 I 0.000
ZNF484 Bos taurus ENSBTAG00000031682 I 0.000
ZNF585A Canis familiaris ENSCAFG00000029327 I 0.000