CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-sbp-1
(
Pristionchus pacificus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
PPA28557
T043961_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA28557
bHLH
338
388
RRTAHNLIEKKYRCSINDRIQTLKNMLSGGSKVMSKSATLRRAIEYIEDLE
Links
Other
bHLH
family TFs
Other
Pristionchus pacificus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold349-EXSNAP2012.17
Pristionchus exspectatus
scaffold349-EXSNAP2012.17
N
0.914
CJA17864
Caenorhabditis japonica
CJA17864
N
0.889
NECAME_14255
Necator americanus
NECAME_14255
I
0.867
TELCIR_06021
Teladorsagia circumcincta
TELCIR_06021
I
0.867
TELCIR_07862
Teladorsagia circumcincta
TELCIR_07862
I
0.867
NBR_0002173001
Nippostrongylus brasiliensis
NBR_0002173001
I
0.867
HCOI01299300
Haemonchus contortus
HCOI01299300
I
0.867
ANCCAN_02634
Ancylostoma caninum
ANCCAN_02634
I
0.867
HCOI02041100
Haemonchus contortus
HCOI02041100
I
0.867
ANCCEY_06558
Ancylostoma ceylanicum
ANCCEY_06558
I
0.867
DICVIV_05621
Dictyocaulus viviparus
DICVIV_05621
I
0.867
sbp-1
Caenorhabditis elegans
WBGene00004735
N
0.857