Sb01g005130 (Sorghum bicolor)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Sb01g005130 T044333_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.209.40.1
M01756_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8070 		0.852 0.875
LRL2
M06738_2.00 		Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH69_col_a 		0.852 0.833
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g005130.1 bHLH 131 178

Links

Other bHLH family TFs
Other Sorghum bicolor TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5BL_DB5410008 Triticum aestivum Traes_5BL_DB5410008 I 0.914
Traes_5DL_1CD573458 Triticum aestivum Traes_5DL_1CD573458 I 0.914
F775_30957 Aegilops tauschii F775_30957 I 0.914
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I 0.888
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I 0.888
OLONG_014165 Oryza longistaminata OLONG_014165 I 0.888
OMERI03G34570 Oryza meridionalis OMERI03G34570 I 0.888
OBART07G05280 Oryza barthii OBART07G05280 I 0.888
OB07G13990 Oryza brachyantha OB07G13990 I 0.888
GRMZM2G162382 Zea mays GRMZM2G162382 I 0.888
LPERR03G31640 Leersia perrieri LPERR03G31640 I 0.888
OMERI05G15760 Oryza meridionalis OMERI05G15760 I 0.888
OBART03G37400 Oryza barthii OBART03G37400 I 0.888
ONIVA07G04020 Oryza nivara ONIVA07G04020 I 0.888
OS03G0797600 Oryza sativa OS03G0797600 I 0.888
Sb02g004570 Sorghum bicolor Sb02g004570 I 0.888
Si036929m.g Setaria italica Si036929m.g I 0.888
Si030704m.g Setaria italica Si030704m.g I 0.888
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I 0.888
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I 0.888
GRMZM2G004356 Zea mays GRMZM2G004356 I 0.888
OPUNC03G34510 Oryza punctata OPUNC03G34510 I 0.888
OPUNC07G05040 Oryza punctata OPUNC07G05040 I 0.888
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I 0.888
ONIVA03G38760 Oryza nivara ONIVA03G38760 I 0.888
LPERR07G04600 Leersia perrieri LPERR07G04600 I 0.888
Pavir.J04249 Panicum virgatum Pavir.J04249 I 0.888
Pavir.J03221 Panicum virgatum Pavir.J03221 I 0.888
BRADI1G05430 Brachypodium distachyon BRADI1G05430 I 0.888
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I 0.888
BGIOSGA025266 Oryza indica BGIOSGA025266 I 0.888
Pavir.J00283 Panicum virgatum Pavir.J00283 I 0.888
BGIOSGA013729 Oryza indica BGIOSGA013729 I 0.888
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I 0.888
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.876
GSMUA_Achr9G25560_001 Musa acuminata GSMUA_Achr9G25560_001 I 0.876
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.876
Gorai.004G218900 Gossypium raimondii Gorai.004G218900 N 0.861
Solyc09g065820.2 Solanum lycopersicum Solyc09g065820.2 N 0.861
Gorai.004G075200 Gossypium raimondii Gorai.004G075200 N 0.861
PGSC0003DMG400019334 Solanum tuberosum PGSC0003DMG400019334 N 0.861
SapurV1A.0100s0120 Salix purpurea SapurV1A.0100s0120 I 0.852
Pavir.Da02078 Panicum virgatum Pavir.Da02078 I 0.852
SapurV1A.0347s0080 Salix purpurea SapurV1A.0347s0080 I 0.852
Pm027715 Prunus mume Pm027715 I 0.852
cassava22164.valid.m1 Manihot esculenta cassava22164.valid.m1 I 0.852
29737.m001209 Ricinus communis 29737.m001209 I 0.852
cassava22165.valid.m1 Manihot esculenta cassava22165.valid.m1 I 0.852
Cla019007 Citrullus lanatus Cla019007 I 0.852
Pavir.J04712 Panicum virgatum Pavir.J04712 I 0.852
VIT_11s0037g00040 Vitis vinifera VIT_11s0037g00040 I 0.852
Thhalv10025656m.g Eutrema salsugineum Thhalv10025656m.g I 0.852
Solyc12g010170.1 Solanum lycopersicum Solyc12g010170.1 I 0.852
PK14040.1 Cannabis sativa PK14040.1 I 0.852
chr6.CM0037.770.nc Lotus japonicus chr6.CM0037.770.nc I 0.852
Si017553m.g Setaria italica Si017553m.g I 0.852
Si029708m.g Setaria italica Si029708m.g I 0.852
TCM_037077 Theobroma cacao TCM_037077 I 0.852
Thhalv10014212m.g Eutrema salsugineum Thhalv10014212m.g I 0.852
Ca_03340 Cicer arietinum Ca_03340 I 0.852
Thhalv10000220m.g Eutrema salsugineum Thhalv10000220m.g I 0.852
Pavir.Bb02117 Panicum virgatum Pavir.Bb02117 I 0.852
TRIUR3_33768 Triticum urartu TRIUR3_33768 I 0.852
Traes_6AL_FD6EC5EA9 Triticum aestivum Traes_6AL_FD6EC5EA9 I 0.852
Cla013823 Citrullus lanatus Cla013823 I 0.852
e_gw1.173.38.1 Physcomitrella patens e_gw1.173.38.1 I 0.852
Carubv10023532m.g Capsella rubella Carubv10023532m.g I 0.852
Carubv10028492m.g Capsella rubella Carubv10028492m.g I 0.852
Carubv10005248m.g Capsella rubella Carubv10005248m.g I 0.852
Cagra.4091s0032 Capsella grandiflora Cagra.4091s0032 I 0.852
Cagra.0380s0028 Capsella grandiflora Cagra.0380s0028 I 0.852
Cagra.2848s0086 Capsella grandiflora Cagra.2848s0086 I 0.852
MDP0000534784 Malus domestica MDP0000534784 I 0.852
Ciclev10008192m.g Citrus clementina Ciclev10008192m.g I 0.852
gene10062-v1.0-hybrid Fragaria vesca gene10062-v1.0-hybrid I 0.852
Gorai.009G055200 Gossypium raimondii Gorai.009G055200 I 0.852
evm.TU.contig_30708.1 Carica papaya evm.TU.contig_30708.1 I 0.852
Eucgr.C02592 Eucalyptus grandis Eucgr.C02592 I 0.852
Eucgr.C00360 Eucalyptus grandis Eucgr.C00360 I 0.852
MDP0000121522 Malus domestica MDP0000121522 I 0.852
SELMODRAFT_444782 Selaginella moellendorffii SELMODRAFT_444782 I 0.852
Bostr.7867s0954 Boechera stricta Bostr.7867s0954 I 0.852
e_gw1.209.40.1 Physcomitrella patens e_gw1.209.40.1 D 0.852
Pavir.Aa00205 Panicum virgatum Pavir.Aa00205 I 0.852
Pavir.Ab03158 Panicum virgatum Pavir.Ab03158 I 0.852
Lus10021846.g Linum usitatissimum Lus10021846.g I 0.852
Cucsa.350940 Cucumis sativus Cucsa.350940 I 0.852
Pavir.Ba01914 Panicum virgatum Pavir.Ba01914 I 0.852
mgf001459m Mimulus guttatus mgf001459m I 0.852
orange1.1g012156m.g Citrus sinensis orange1.1g012156m.g I 0.852
Bostr.26833s0448 Boechera stricta Bostr.26833s0448 I 0.852
Bostr.27895s0056 Boechera stricta Bostr.27895s0056 I 0.852
Aquca_016_00200 Aquilegia coerulea Aquca_016_00200 I 0.852
mgf014585m Mimulus guttatus mgf014585m I 0.852
mgf009435m Mimulus guttatus mgf009435m I 0.852
Cucsa.132830 Cucumis sativus Cucsa.132830 I 0.852
Sb04g035890 Sorghum bicolor Sb04g035890 I 0.852
GLYMA17G08300 Glycine max GLYMA17G08300 I 0.852
GRMZM2G027563 Zea mays GRMZM2G027563 I 0.852
GRMZM2G067654 Zea mays GRMZM2G067654 I 0.852
GLYMA15G33020 Glycine max GLYMA15G33020 I 0.852
GLYMA09G14380 Glycine max GLYMA09G14380 I 0.852
LRL1 Arabidopsis lyrata fgenesh2_kg.4__341__AT2G24260.1 I 0.852
LRL2 Arabidopsis lyrata fgenesh2_kg.7__1084__AT4G30980.1 I 0.852
GLYMA02G36380 Glycine max GLYMA02G36380 I 0.852
GRMZM2G350165 Zea mays GRMZM2G350165 I 0.852
GSMUA_Achr10G24090_001 Musa acuminata GSMUA_Achr10G24090_001 I 0.852
SELMODRAFT_422025 Selaginella moellendorffii SELMODRAFT_422025 I 0.852
MLOC_13438 Hordeum vulgare MLOC_13438 I 0.852
MLOC_38567 Hordeum vulgare MLOC_38567 I 0.852
LPERR02G29460 Leersia perrieri LPERR02G29460 I 0.852
GSMUA_Achr5G16470_001 Musa acuminata GSMUA_Achr5G16470_001 I 0.852
GSMUA_Achr10G30710_001 Musa acuminata GSMUA_Achr10G30710_001 I 0.852
GSMUA_Achr4G01910_001 Musa acuminata GSMUA_Achr4G01910_001 I 0.852
LRL3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001435 I 0.852
BRADI1G47350 Brachypodium distachyon BRADI1G47350 I 0.852
Bo1g011740 Brassica oleracea Bo1g011740 I 0.852
Bo2g028920 Brassica oleracea Bo2g028920 I 0.852
Bo3g018990 Brassica oleracea Bo3g018990 I 0.852
BGIOSGA029759 Oryza indica BGIOSGA029759 I 0.852
BGIOSGA021777 Oryza indica BGIOSGA021777 I 0.852
BHLH66 Arabidopsis thaliana AT2G24260 I 0.852
LRL2 Arabidopsis thaliana AT4G30980 D 0.852
BHLH82 Arabidopsis thaliana AT5G58010 I 0.852
Bo4g154370 Brassica oleracea Bo4g154370 I 0.852
Bo8g099910 Brassica oleracea Bo8g099910 I 0.852
Bra011237 Brassica rapa Bra011237 I 0.852
Bra020398 Brassica rapa Bra020398 I 0.852
Bra032111 Brassica rapa Bra032111 I 0.852
Bra007863 Brassica rapa Bra007863 I 0.852
Bra006788 Brassica rapa Bra006788 I 0.852
Bo9g133640 Brassica oleracea Bo9g133640 I 0.852
Bra002679 Brassica rapa Bra002679 I 0.852
MTR_4g131160 Medicago truncatula MTR_4g131160 I 0.852
LPERR09G07210 Leersia perrieri LPERR09G07210 I 0.852
POPTR_0018s11800 Populus trichocarpa POPTR_0018s11800 I 0.852
PRUPE_ppa005254mg Prunus persica PRUPE_ppa005254mg I 0.852
ORGLA02G0311000 Oryza glaberrima ORGLA02G0311000 I 0.852
AMTR_s00065p00184910 Amborella trichopoda AMTR_s00065p00184910 I 0.852
ORUFI02G37320 Oryza rufipogon ORUFI02G37320 I 0.852
ORUFI06G05560 Oryza rufipogon ORUFI06G05560 I 0.852
OS06G0184000 Oryza sativa OS06G0184000 I 0.852
PGSC0003DMG400007827 Solanum tuberosum PGSC0003DMG400007827 I 0.852
PGSC0003DMG400011133 Solanum tuberosum PGSC0003DMG400011133 I 0.852
OB06G14990 Oryza brachyantha OB06G14990 I 0.852
ONIVA09G10010 Oryza nivara ONIVA09G10010 I 0.852
Sb02g024750 Sorghum bicolor Sb02g024750 I 0.852
OGLUM09G10750 Oryza glumaepatula OGLUM09G10750 I 0.852
Sb10g005650 Sorghum bicolor Sb10g005650 I 0.852
OGLUM06G05610 Oryza glumaepatula OGLUM06G05610 I 0.852
OGLUM02G37030 Oryza glumaepatula OGLUM02G37030 I 0.852
SELMODRAFT_24892 Selaginella moellendorffii SELMODRAFT_24892 I 0.852
OBART06G05420 Oryza barthii OBART06G05420 I 0.852
OMERI02G33790 Oryza meridionalis OMERI02G33790 I 0.852
SELMODRAFT_24890 Selaginella moellendorffii SELMODRAFT_24890 I 0.852
ONIVA02G37880 Oryza nivara ONIVA02G37880 I 0.852
ONIVA06G06250 Oryza nivara ONIVA06G06250 I 0.852
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.846
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.846
PK20184.1 Cannabis sativa PK20184.1 N 0.846
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.846
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.846
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.846
TCM_026346 Theobroma cacao TCM_026346 N 0.846
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.846
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.846
29598.m000464 Ricinus communis 29598.m000464 N 0.846
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.846
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.846
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.846
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.846
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.846
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.846
Pm003525 Prunus mume Pm003525 N 0.846
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.846
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.846
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.846
Ca_03755 Cicer arietinum Ca_03755 N 0.846
MDP0000295593 Malus domestica MDP0000295593 N 0.846
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.846
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.846
Cla011475 Citrullus lanatus Cla011475 N 0.846
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.843
Solyc07g005400.2 Solanum lycopersicum Solyc07g005400.2 I 0.841
MDP0000606021 Malus domestica MDP0000606021 I 0.840