ZIC1 (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000152977 T044411_1.02 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID DBD
Identity
ZIC1
M4147_1.02
Homo sapiens
BRGKKNGTM

KRCNMMCYV
Transfac
Matys et al.(2006)
V$ZIC1_01
(Direct)
ZIC1
M5963_1.02
Homo sapiens
CRCAGCRGGGGGYM

KRCCCCCYGCTGYG
SELEX
Jolma et al.(2013)
ZIC1_1
(Direct)
ZIC1
M6548_1.02
Homo sapiens
KGGGDGSKV

BMSCHCCCM
HocoMoco
Kulakovskiy et al.(2013)
ZIC1_f1
(Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID DBD
Identity
Zic1
M0412_1.02
Mus musculus
MNCNVBRKGN

NCMYVBNGNK
PBM
Badis et al.(2009)
Zic1_0991
0.992
ZIC2
M4148_1.02
Homo sapiens
DGGGKGGTB

VACCMCCCH
Transfac
Matys et al.(2006)
V$ZIC2_01
0.975
ZIC2
M6549_1.02
Homo sapiens
DGGGDGGTN

NACCHCCCH
HocoMoco
Kulakovskiy et al.(2013)
ZIC2_f1
0.975
Zic2
M0439_1.02
Mus musculus
NNYNRBRKGN

NCMYVYNRNN
PBM
Badis et al.(2009)
Zic2_2895
0.967
ZIC3
M5964_1.02
Homo sapiens
DCRCMGCRGGGGGTV

BACCCCCYGCKGYGH
SELEX
Jolma et al.(2013)
ZIC3_1
0.926
ZIC3
M4150_1.02
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZIC3_07
0.926
ZIC3
M4149_1.02
Homo sapiens
NGGGKGVYB

VRBCMCCCN
Transfac
Matys et al.(2006)
V$ZIC3_01
0.926
ZIC3
M6550_1.02
Homo sapiens
BGGGDGVYB

VRBCHCCCV
HocoMoco
Kulakovskiy et al.(2013)
ZIC3_f1
0.926
Zic3
M6113_1.02
Mus musculus
DCRCAGCRGGGGGYM

KRCCCCCYGCTGYGH
SELEX
Jolma et al.(2013)
Zic3_1
0.926
Zic3
M0441_1.02
Mus musculus
VNYNVBRKGN

NCMYVBNRNB
PBM
Badis et al.(2009)
Zic3_3119
0.919
ZIC4
M5965_1.02
Homo sapiens
DCNCHRCRGGGGGYM

KRCCCCCYGYDGNGH
SELEX
Jolma et al.(2013)
ZIC4_1
0.896
Zic5
M0422_1.02
Mus musculus
SHRGGGGGYV

BRCCCCCYDS
PBM
Weirauch et al.(2013)
pTH2818
0.872
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000282928 C2H2 ZF 240 260
ENSP00000282928 C2H2 ZF 269 296
ENSP00000282928 C2H2 ZF 302 326
ENSP00000282928 C2H2 ZF 332 356
ENSP00000282928 C2H2 ZF 362 384
ENSP00000419664 C2H2 ZF 21 45
ENSP00000419664 C2H2 ZF 51 73

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

0 Related TFs

">No related TF found