CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb07g025310
(
Sorghum bicolor
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Sb07g025310
T044449_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV
BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.840
0.571
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb07g025310.1
bHLH
105
153
GVSHVEAERQRREKLNRRFCDLRATVPTVSRMDKASLLADATAYIAELR
Links
Other
bHLH
family TFs
Other
Sorghum bicolor
TFs
134 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA09G0131400
Oryza glaberrima
ORGLA09G0131400
I
0.903
GRMZM2G107560
Zea mays
GRMZM2G107560
I
0.903
GRMZM2G038479
Zea mays
GRMZM2G038479
I
0.903
GRMZM2G013688
Zea mays
GRMZM2G013688
I
0.903
ORUFI08G24840
Oryza rufipogon
ORUFI08G24840
I
0.903
ORGLA08G0221300
Oryza glaberrima
ORGLA08G0221300
I
0.903
ONIVA09G17720
Oryza nivara
ONIVA09G17720
I
0.903
OGLUM08G23650
Oryza glumaepatula
OGLUM08G23650
I
0.903
LPERR09G12780
Leersia perrieri
LPERR09G12780
I
0.903
OGLUM09G17250
Oryza glumaepatula
OGLUM09G17250
I
0.903
OMERI08G17270
Oryza meridionalis
OMERI08G17270
I
0.903
ONIVA08G25370
Oryza nivara
ONIVA08G25370
I
0.903
ORUFI09G17940
Oryza rufipogon
ORUFI09G17940
I
0.903
OS08G0543700
Oryza sativa
OS08G0543700
I
0.903
Pavir.J01049
Panicum virgatum
Pavir.J01049
I
0.903
Pavir.Ba01307
Panicum virgatum
Pavir.Ba01307
I
0.903
BGIOSGA029426
Oryza indica
BGIOSGA029426
I
0.903
BGIOSGA026551
Oryza indica
BGIOSGA026551
I
0.903
Pavir.J40111
Panicum virgatum
Pavir.J40111
I
0.903
Pavir.Ba01305
Panicum virgatum
Pavir.Ba01305
I
0.903
Si032741m.g
Setaria italica
Si032741m.g
I
0.903
Sb02g030110
Sorghum bicolor
Sb02g030110
I
0.903
OS09G0519100
Oryza sativa
OS09G0519100
I
0.903
Sb02g030120
Sorghum bicolor
Sb02g030120
I
0.903
Si015513m.g
Setaria italica
Si015513m.g
I
0.903
Si031900m.g
Setaria italica
Si031900m.g
I
0.903
LPERR03G22350
Leersia perrieri
LPERR03G22350
I
0.903
Sb07g025340
Sorghum bicolor
Sb07g025340
N
0.887
Si015026m.g
Setaria italica
Si015026m.g
N
0.879
Si015343m.g
Setaria italica
Si015343m.g
N
0.879
Si015024m.g
Setaria italica
Si015024m.g
N
0.879
Sb07g025330
Sorghum bicolor
Sb07g025330
N
0.879
GRMZM2G472671
Zea mays
GRMZM2G472671
N
0.879
Pavir.Fb02191
Panicum virgatum
Pavir.Fb02191
N
0.879
BRADI4G35400
Brachypodium distachyon
BRADI4G35400
N
0.879
Traes_5DL_F32936F9C
Triticum aestivum
Traes_5DL_F32936F9C
N
0.879
Traes_5DL_5DA6E1A09
Triticum aestivum
Traes_5DL_5DA6E1A09
N
0.879
MLOC_40535
Hordeum vulgare
MLOC_40535
N
0.879
Traes_5BL_C753673FD
Triticum aestivum
Traes_5BL_C753673FD
N
0.879
Traes_5BL_E86F89671
Triticum aestivum
Traes_5BL_E86F89671
N
0.879
Pavir.Fb00905
Panicum virgatum
Pavir.Fb00905
N
0.876
Pavir.Fa00118
Panicum virgatum
Pavir.Fa00118
N
0.876
LPERR08G19100
Leersia perrieri
LPERR08G19100
I
0.873
Gorai.004G129600
Gossypium raimondii
Gorai.004G129600
I
0.870
Pavir.J27331
Panicum virgatum
Pavir.J27331
N
0.868
BRADI3G41950
Brachypodium distachyon
BRADI3G41950
N
0.865
Si014241m.g
Setaria italica
Si014241m.g
N
0.860
Si015213m.g
Setaria italica
Si015213m.g
N
0.860
Sb2273s002010
Sorghum bicolor
Sb2273s002010
N
0.857
GLYMA03G30940
Glycine max
GLYMA03G30940
I
0.852
Lus10005999.g
Linum usitatissimum
Lus10005999.g
I
0.852
GSMUA_Achr4G16980_001
Musa acuminata
GSMUA_Achr4G16980_001
I
0.851
F775_01879
Aegilops tauschii
F775_01879
N
0.849
Traes_2BL_F38E03233
Triticum aestivum
Traes_2BL_F38E03233
N
0.849
Traes_2BL_F38E032331
Triticum aestivum
Traes_2BL_F38E032331
N
0.849
MDP0000160600
Malus domestica
MDP0000160600
I
0.849
Traes_5BL_D45BBFEBC
Triticum aestivum
Traes_5BL_D45BBFEBC
N
0.849
TRIUR3_29141
Triticum urartu
TRIUR3_29141
N
0.849
Pavir.J19529
Panicum virgatum
Pavir.J19529
N
0.847
F775_42459
Aegilops tauschii
F775_42459
N
0.845
MTR_5g014640
Medicago truncatula
MTR_5g014640
I
0.844
BRADI3G41930
Brachypodium distachyon
BRADI3G41930
N
0.844
Sb07g025320
Sorghum bicolor
Sb07g025320
N
0.842
GSMUA_Achr8G11430_001
Musa acuminata
GSMUA_Achr8G11430_001
N
0.841
cassava29522.valid.m1
Manihot esculenta
cassava29522.valid.m1
I
0.840
Ciclev10011214m.g
Citrus clementina
Ciclev10011214m.g
I
0.840
Aquca_054_00130
Aquilegia coerulea
Aquca_054_00130
I
0.840
Ciclev10019118m.g
Citrus clementina
Ciclev10019118m.g
I
0.840
cassava24625.valid.m1
Manihot esculenta
cassava24625.valid.m1
I
0.840
Cucsa.313090
Cucumis sativus
Cucsa.313090
I
0.840
Thhalv10028584m.g
Eutrema salsugineum
Thhalv10028584m.g
I
0.840
PK09702.1
Cannabis sativa
PK09702.1
D
0.840
Eucgr.H01487
Eucalyptus grandis
Eucgr.H01487
I
0.840
SapurV1A.0741s0050
Salix purpurea
SapurV1A.0741s0050
I
0.840
cassava8764.m1
Manihot esculenta
cassava8764.m1
I
0.840
Aquca_026_00421
Aquilegia coerulea
Aquca_026_00421
I
0.840
cassava45205.m1
Manihot esculenta
cassava45205.m1
I
0.840
Pavir.J38781
Panicum virgatum
Pavir.J38781
I
0.840
orange1.1g037798m.g
Citrus sinensis
orange1.1g037798m.g
I
0.840
orange1.1g005651m.g
Citrus sinensis
orange1.1g005651m.g
I
0.840
MDP0000617077
Malus domestica
MDP0000617077
I
0.840
BRADI3G34200
Brachypodium distachyon
BRADI3G34200
I
0.840
BRADI1G54070
Brachypodium distachyon
BRADI1G54070
I
0.840
BGIOSGA033493
Oryza indica
BGIOSGA033493
I
0.840
Pavir.J28686
Panicum virgatum
Pavir.J28686
I
0.840
MDP0000225680
Malus domestica
MDP0000225680
I
0.840
Lus10030970.g
Linum usitatissimum
Lus10030970.g
I
0.840
Pavir.Ia03512
Panicum virgatum
Pavir.Ia03512
I
0.840
AMTR_s00025p00048410
Amborella trichopoda
AMTR_s00025p00048410
I
0.840
SapurV1A.0076s0350
Salix purpurea
SapurV1A.0076s0350
I
0.840
gene27827-v1.0-hybrid
Fragaria vesca
gene27827-v1.0-hybrid
I
0.840
29827.m002528
Ricinus communis
29827.m002528
I
0.840
Gorai.007G136400
Gossypium raimondii
Gorai.007G136400
I
0.840
Gorai.004G215900
Gossypium raimondii
Gorai.004G215900
I
0.840
evm.TU.supercontig_71.72
Carica papaya
evm.TU.supercontig_71.72
I
0.840
TCM_015714
Theobroma cacao
TCM_015714
I
0.840
OPUNC10G17860
Oryza punctata
OPUNC10G17860
I
0.840
ONIVA10G22030
Oryza nivara
ONIVA10G22030
I
0.840
GSMUA_Achr11G17840_001
Musa acuminata
GSMUA_Achr11G17840_001
I
0.840
GRMZM2G049229
Zea mays
GRMZM2G049229
I
0.840
ORGLA10G0146100
Oryza glaberrima
ORGLA10G0146100
I
0.840
ORUFI10G20700
Oryza rufipogon
ORUFI10G20700
I
0.840
GLYMA10G03140
Glycine max
GLYMA10G03140
I
0.840
GRMZM2G001930
Zea mays
GRMZM2G001930
I
0.840
GSMUA_Achr2G18140_001
Musa acuminata
GSMUA_Achr2G18140_001
I
0.840
GSMUA_Achr3G17620_001
Musa acuminata
GSMUA_Achr3G17620_001
I
0.840
LPERR10G15300
Leersia perrieri
LPERR10G15300
I
0.840
GSMUA_Achr7G04720_001
Musa acuminata
GSMUA_Achr7G04720_001
I
0.840
GSMUA_AchrUn_randomG02900_001
Musa acuminata
GSMUA_AchrUn_randomG02900_001
I
0.840
MLOC_71611
Hordeum vulgare
MLOC_71611
I
0.840
MTR_1g072320
Medicago truncatula
MTR_1g072320
I
0.840
OLONG_011820
Oryza longistaminata
OLONG_011820
I
0.840
OGLUM10G19510
Oryza glumaepatula
OGLUM10G19510
I
0.840
GSMUA_Achr6G21490_001
Musa acuminata
GSMUA_Achr6G21490_001
I
0.840
GLYMA02G16670
Glycine max
GLYMA02G16670
I
0.840
MYC2
Oryza sativa
OS10G0575000
I
0.840
GSMUA_Achr8G14720_001
Musa acuminata
GSMUA_Achr8G14720_001
I
0.840
TCM_004403
Theobroma cacao
TCM_004403
I
0.840
Solyc09g065100.1
Solanum lycopersicum
Solyc09g065100.1
I
0.840
VIT_02s0012g01320
Vitis vinifera
VIT_02s0012g01320
I
0.840
TT8
Vitis vinifera
VIT_07s0104g00090
I
0.840
Pm020164
Prunus mume
Pm020164
I
0.840
Cla016454
Citrullus lanatus
Cla016454
I
0.840
Ca_07836
Cicer arietinum
Ca_07836
I
0.840
Si039973m.g
Setaria italica
Si039973m.g
I
0.840
Si029106m.g
Setaria italica
Si029106m.g
I
0.840
POPTR_0005s23020
Populus trichocarpa
POPTR_0005s23020
I
0.840
POPTR_0001s02450
Populus trichocarpa
POPTR_0001s02450
I
0.840
PGSC0003DMG400012891
Solanum tuberosum
PGSC0003DMG400012891
I
0.840
PRUPE_ppa002884m2g
Prunus persica
PRUPE_ppa002884m2g
I
0.840
Sb01g028230
Sorghum bicolor
Sb01g028230
I
0.840
AMTR_s00002p00225810
Amborella trichopoda
AMTR_s00002p00225810
I
0.840
Sb02g006390
Sorghum bicolor
Sb02g006390
I
0.840
29647.m002101
Ricinus communis
29647.m002101
I
0.840