CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb07g028945
(
Sorghum bicolor
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Sb07g028945
T044457_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.902
0.898
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH
DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.902
0.878
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC
GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.902
0.878
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.902
0.878
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY
RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.902
0.878
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.902
0.878
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC
GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.875
0.857
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN
NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.862
0.796
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.862
0.796
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.852
0.816
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.852
0.796
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT
ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.852
0.796
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN
NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.842
0.735
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb07g028945.1
bHLH
182
231
TNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQ
Links
Other
bHLH
family TFs
Other
Sorghum bicolor
TFs
911 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy