Si000698m.g (Setaria italica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Si000698m.g T044667_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK05451.1
M01120_2.00
Cannabis sativa
YCACGTGM

KCACGTGR
PBM
Lambert et al.(2019)
pTH10100
0.901 0.980
PIF3
M00854_2.00
Arabidopsis thaliana
CACGTGSNN

NNSCACGTG
PBM
Franco-Zorrilla et al.(2014)
PIF3
0.901 0.959
PIF3
M00722_2.00
Arabidopsis thaliana
NCACRTN

NAYGTGN
PBM
Chang et al.(2013)
pTH8200
0.901 0.959
PIF3
M08045_2.00
Arabidopsis thaliana
HCACGTGGVH

DBCCACGTGD
ChIP-seq
Mathelier et al.(2014)
MA0560.1
0.901 0.959
PIF3
M09780_2.00
Arabidopsis thaliana
BDRRRVCACGTGRVSHCD

HGDSBYCACGTGBYYYHV
Transfac
Matys et al.(2006)
P$PIF3_01
0.901 0.959
PIF3
M09781_2.00
Arabidopsis thaliana
DDDVCCACGTGGVMVNB

VNBKBCCACGTGGBHHH
Transfac
Matys et al.(2006)
P$PIF3_02
0.901 0.959
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN

NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.877 0.857
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.872 0.633
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG

CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.872 0.592
PIF1
M01703_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8733
0.868 0.857
PIF1
M08404_2.00
Arabidopsis thaliana
NCACGTGWSNYNHH

DDNRNSWCACGTGN
ChIP-chip
Mathelier et al.(2014)
MA0552.1
0.868 0.857
PIF1
M09783_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PIF1_01
0.868 0.857
PIF4
M08046_2.00
Arabidopsis thaliana
CACGTGSV

BSCACGTG
ChIP-seq
Mathelier et al.(2014)
MA0561.1
0.868 0.837
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS

SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.855 0.816
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV

BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.855 0.816
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM

KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.840 0.673
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si000694m bHLH 368 416
Si000695m bHLH 368 416
Si000696m bHLH 368 416
Si000697m bHLH 368 416
Si000698m bHLH 368 416
Si000700m bHLH 368 416

Links

Other bHLH family TFs
Other Setaria italica TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIBMGA001000 Bombyx mori BGIBMGA001000 I 0.000
l(1)sc Drosophila yakuba FBgn0025398 I 0.000
l(1)sc Drosophila simulans FBgn0025409 I 0.000
l(1)sc Drosophila erecta FBgn0028821 I 0.000
GA17723 Drosophila pseudoobscura FBgn0077733 I 0.000
GF21451 Drosophila ananassae FBgn0098452 I 0.000
GH24341 Drosophila grimshawi FBgn0131797 I 0.000
GI10999 Drosophila mojavensis FBgn0133762 I 0.000
GL20379 Drosophila persimilis FBgn0157974 I 0.000
GJ15597 Drosophila virilis FBgn0202787 I 0.000
GK25271 Drosophila willistoni FBgn0227230 I 0.000
HMEL006592 Heliconius melpomene HMEL006592 I 0.000
KGM_17275 Danaus plexippus KGM_17275 I 0.000
LCUP011237 Lucilia cuprina LCUP011237 I 0.000
MCINX016280 Melitaea cinxia MCINX016280 I 0.000
MDOA005556 Musca domestica MDOA005556 I 0.000