CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si000845m.g
(
Setaria italica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Si000845m.g
T044668_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BIM2
M01701_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8089
0.841
0.429
BIM2
M06727_2.00
Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_colamp
0.841
0.429
BIM2
M06728_2.00
Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_col_v3b
0.841
0.429
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000845m
bHLH
372
420
VKNHVMSERKRREKLNEMFLVLKSLVPSIHKVDKASILAETIAYLKELQ
Links
Other
bHLH
family TFs
Other
Setaria italica
TFs
179 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy