Si002517m.g (Setaria italica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Si002517m.g T044677_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN

NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.845 0.776
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si002517m bHLH 80 128

Links

Other bHLH family TFs
Other Setaria italica TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.841
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.855
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.881
PK20225.1 Cannabis sativa PK20225.1 D 0.845
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.845
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.845
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.845
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.844
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.902
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.845
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.873
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.902
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.860
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.843
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.845
MDP0000256492 Malus domestica MDP0000256492 N 0.880
MDP0000249969 Malus domestica MDP0000249969 I 0.854
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.875
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.873
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N 0.869
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N 0.860
GSMUA_Achr7G10740_001 Musa acuminata GSMUA_Achr7G10740_001 I 0.838
GSMUA_Achr10G14370_001 Musa acuminata GSMUA_Achr10G14370_001 N 0.845
OB01G17480 Oryza brachyantha OB01G17480 I 0.890
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.890
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.890
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.890
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.890
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.890
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.890
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.890
OS01G0218100 Oryza sativa OS01G0218100 I 0.890
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.902
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.902
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N 0.880
29900.m001610 Ricinus communis 29900.m001610 I 0.851
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N 0.854
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.902
TCM_029711 Theobroma cacao TCM_029711 I 0.873
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.902
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.875
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.902
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.902