Si024086m.g (Setaria italica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Si024086m.g T044768_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.843 0.660
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si024086m bHLH 165 211

Links

Other bHLH family TFs
Other Setaria italica TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J26871 Panicum virgatum Pavir.J26871 I 0.914
GRMZM2G036554 Zea mays GRMZM2G036554 I 0.894
Pavir.Ca01239 Panicum virgatum Pavir.Ca01239 N 0.884
Pavir.J30022 Panicum virgatum Pavir.J30022 I 0.882
OPUNC03G26600 Oryza punctata OPUNC03G26600 I 0.871
OMERI12G15000 Oryza meridionalis OMERI12G15000 I 0.871
GRMZM2G068604 Zea mays GRMZM2G068604 I 0.871
ONIVA03G07570 Oryza nivara ONIVA03G07570 I 0.871
OPUNC12G17950 Oryza punctata OPUNC12G17950 I 0.871
ORUFI12G22050 Oryza rufipogon ORUFI12G22050 I 0.871
ORGLA12G0170500 Oryza glaberrima ORGLA12G0170500 I 0.871
ORGLA03G0269200 Oryza glaberrima ORGLA03G0269200 I 0.871
GRMZM2G155043 Zea mays GRMZM2G155043 I 0.871
GRMZM2G049686 Zea mays GRMZM2G049686 I 0.871
OMERI03G25360 Oryza meridionalis OMERI03G25360 I 0.871
OGLUM12G21470 Oryza glumaepatula OGLUM12G21470 I 0.871
MLOC_42946 Hordeum vulgare MLOC_42946 I 0.871
OGLUM03G29270 Oryza glumaepatula OGLUM03G29270 I 0.871
OBART12G19700 Oryza barthii OBART12G19700 I 0.871
LPERR12G16560 Leersia perrieri LPERR12G16560 I 0.871
OLONG_002504 Oryza longistaminata OLONG_002504 I 0.871
OS12G0632600 Oryza sativa OS12G0632600 I 0.871
OLONG_017178 Oryza longistaminata OLONG_017178 I 0.871
LPERR03G24050 Leersia perrieri LPERR03G24050 I 0.871
GRMZM2G355469 Zea mays GRMZM2G355469 I 0.871
Sb06g017460 Sorghum bicolor Sb06g017460 I 0.871
Pavir.Ia01059 Panicum virgatum Pavir.Ia01059 I 0.871
Pavir.Ia01038 Panicum virgatum Pavir.Ia01038 I 0.871
Pavir.Ia01004 Panicum virgatum Pavir.Ia01004 I 0.871
TRIUR3_05977 Triticum urartu TRIUR3_05977 I 0.871
BGIOSGA037855 Oryza indica BGIOSGA037855 I 0.871
Pavir.Ib04096 Panicum virgatum Pavir.Ib04096 I 0.871
Pavir.Ib04190 Panicum virgatum Pavir.Ib04190 I 0.871
BGIOSGA010080 Oryza indica BGIOSGA010080 I 0.871
Pavir.Ib04188 Panicum virgatum Pavir.Ib04188 I 0.871
Traes_4DS_6A9EB40A4 Triticum aestivum Traes_4DS_6A9EB40A4 I 0.871
Si039325m.g Setaria italica Si039325m.g I 0.871
Sb08g022760 Sorghum bicolor Sb08g022760 I 0.871
F775_11635 Aegilops tauschii F775_11635 I 0.871
OB03G36530 Oryza brachyantha OB03G36530 I 0.871
Sb01g012280 Sorghum bicolor Sb01g012280 I 0.871
Si011972m.g Setaria italica Si011972m.g I 0.871
Si036185m.g Setaria italica Si036185m.g I 0.871
BRADI1G12770 Brachypodium distachyon BRADI1G12770 I 0.871
Sb01g012260 Sorghum bicolor Sb01g012260 I 0.871
BRADI4G00920 Brachypodium distachyon BRADI4G00920 I 0.871
Si038721m.g Setaria italica Si038721m.g I 0.871
TRIUR3_13152 Triticum urartu TRIUR3_13152 I 0.870
Si011709m.g Setaria italica Si011709m.g I 0.870
GLYMA05G23291 Glycine max GLYMA05G23291 I 0.870
F775_12608 Aegilops tauschii F775_12608 I 0.870
MTR_4g097940 Medicago truncatula MTR_4g097940 I 0.867
GLYMA17G16741 Glycine max GLYMA17G16741 I 0.867
Ca_05320 Cicer arietinum Ca_05320 I 0.867
Gorai.012G161900 Gossypium raimondii Gorai.012G161900 I 0.864
ONIVA03G30250 Oryza nivara ONIVA03G30250 I 0.852
OPUNC03G26580 Oryza punctata OPUNC03G26580 I 0.852
Ca_02264 Cicer arietinum Ca_02264 I 0.852
MTR_5g014520 Medicago truncatula MTR_5g014520 I 0.852
ORUFI03G30180 Oryza rufipogon ORUFI03G30180 I 0.852
BGIOSGA013293 Oryza indica BGIOSGA013293 I 0.852
OGLUM03G29200 Oryza glumaepatula OGLUM03G29200 I 0.852
GLYMA01G40620 Glycine max GLYMA01G40620 I 0.852
mg004185m Mimulus guttatus mg004185m I 0.849
mg008709m Mimulus guttatus mg008709m I 0.849
GRMZM2G120021 Zea mays GRMZM2G120021 I 0.847
Pavir.Ia03339 Panicum virgatum Pavir.Ia03339 I 0.846
Eucgr.H02386 Eucalyptus grandis Eucgr.H02386 I 0.846
Bra030210 Brassica rapa Bra030210 I 0.843
AT2G22750 Arabidopsis thaliana AT2G22750 D 0.843
PGSC0003DMG400005101 Solanum tuberosum PGSC0003DMG400005101 I 0.843
MDP0000170202 Malus domestica MDP0000170202 I 0.843
Bra039924 Brassica rapa Bra039924 I 0.843
evm.TU.supercontig_20.63 Carica papaya evm.TU.supercontig_20.63 I 0.843
PDK_20s1394471g002 Phoenix dactylifera PDK_20s1394471g002 I 0.843
Solyc01g106460.2 Solanum lycopersicum Solyc01g106460.2 I 0.843
Ca_09379 Cicer arietinum Ca_09379 I 0.843
Thhalv10000426m.g Eutrema salsugineum Thhalv10000426m.g I 0.843
MTR_4g097920 Medicago truncatula MTR_4g097920 I 0.843
Bo4g150960 Brassica oleracea Bo4g150960 I 0.843
MDP0000159571 Malus domestica MDP0000159571 I 0.843
Carubv10023610m.g Capsella rubella Carubv10023610m.g N 0.842
NAI1 Arabidopsis lyrata fgenesh2_kg.4__198__AT2G22770.1 N 0.842
Cagra.0882s0006 Capsella grandiflora Cagra.0882s0006 N 0.842
Thhalv10000251m.g Eutrema salsugineum Thhalv10000251m.g N 0.842
NAI1 Arabidopsis thaliana AT2G22770 N 0.842
Bostr.19427s0044 Boechera stricta Bostr.19427s0044 N 0.842
cassava37087.valid.m1 Manihot esculenta cassava37087.valid.m1 I 0.841
Cucsa.218800 Cucumis sativus Cucsa.218800 I 0.841
Eucgr.I02518 Eucalyptus grandis Eucgr.I02518 I 0.841
evm.TU.supercontig_129.37 Carica papaya evm.TU.supercontig_129.37 I 0.841
cassava20178.m1 Manihot esculenta cassava20178.m1 I 0.841
cassava35671.valid.m1 Manihot esculenta cassava35671.valid.m1 I 0.841
Eucgr.I00634 Eucalyptus grandis Eucgr.I00634 I 0.841
Cagra.6066s0006 Capsella grandiflora Cagra.6066s0006 I 0.841
Cagra.5392s0006 Capsella grandiflora Cagra.5392s0006 I 0.841
Ciclev10028925m.g Citrus clementina Ciclev10028925m.g I 0.841
gene05610-v1.0-hybrid Fragaria vesca gene05610-v1.0-hybrid I 0.841
Carubv10025041m.g Capsella rubella Carubv10025041m.g I 0.841
Aquca_010_00012 Aquilegia coerulea Aquca_010_00012 I 0.841
Carubv10006834m.g Capsella rubella Carubv10006834m.g I 0.841
Ciclev10027158m.g Citrus clementina Ciclev10027158m.g I 0.841
MDP0000174149 Malus domestica MDP0000174149 I 0.841
Pavir.J35103 Panicum virgatum Pavir.J35103 I 0.841
SapurV1A.0019s0910 Salix purpurea SapurV1A.0019s0910 I 0.841
Pavir.J01849 Panicum virgatum Pavir.J01849 I 0.841
BHLH25 Arabidopsis thaliana AT4G37850 I 0.841
BGIOSGA013493 Oryza indica BGIOSGA013493 I 0.841
SapurV1A.0279s0180 Salix purpurea SapurV1A.0279s0180 I 0.841
SapurV1A.3034s0010 Salix purpurea SapurV1A.3034s0010 I 0.841
chr2.CM0021.410.nc Lotus japonicus chr2.CM0021.410.nc I 0.841
PDK_20s1524891g002 Phoenix dactylifera PDK_20s1524891g002 I 0.841
PK11573.1 Cannabis sativa PK11573.1 I 0.841
PK09122.1 Cannabis sativa PK09122.1 I 0.841
Thhalv10025715m.g Eutrema salsugineum Thhalv10025715m.g I 0.841
Bo1g003350 Brassica oleracea Bo1g003350 I 0.841
Bo3g153150 Brassica oleracea Bo3g153150 I 0.841
Lus10003488.g Linum usitatissimum Lus10003488.g I 0.841
Lus10039639.g Linum usitatissimum Lus10039639.g I 0.841
Gorai.007G228900 Gossypium raimondii Gorai.007G228900 I 0.841
Gorai.003G034700 Gossypium raimondii Gorai.003G034700 I 0.841
Gorai.002G211500 Gossypium raimondii Gorai.002G211500 I 0.841
cassava18197.valid.m1 Manihot esculenta cassava18197.valid.m1 I 0.841
MDP0000291132 Malus domestica MDP0000291132 I 0.841
orange1.1g037441m.g Citrus sinensis orange1.1g037441m.g I 0.841
Bra010617 Brassica rapa Bra010617 I 0.841
orange1.1g021208m.g Citrus sinensis orange1.1g021208m.g I 0.841
MDP0000502440 Malus domestica MDP0000502440 I 0.841
MDP0000318216 Malus domestica MDP0000318216 I 0.841
gene05612-v1.0-hybrid Fragaria vesca gene05612-v1.0-hybrid I 0.841
Pm002304 Prunus mume Pm002304 I 0.841
POPTR_0005s09810 Populus trichocarpa POPTR_0005s09810 I 0.841
POPTR_0009s08500 Populus trichocarpa POPTR_0009s08500 I 0.841
POPTR_0001s29400 Populus trichocarpa POPTR_0001s29400 I 0.841
OS03G0725800 Oryza sativa OS03G0725800 I 0.841
ORUFI03G33950 Oryza rufipogon ORUFI03G33950 I 0.841
OBART03G29020 Oryza barthii OBART03G29020 I 0.841
PRUPE_ppa007561mg Prunus persica PRUPE_ppa007561mg I 0.841
PRUPE_ppa008130mg Prunus persica PRUPE_ppa008130mg I 0.841
F775_11371 Aegilops tauschii F775_11371 I 0.841
SELMODRAFT_34848 Selaginella moellendorffii SELMODRAFT_34848 I 0.841
fgenesh2_kg.4__196__AT2G22750.1 Arabidopsis lyrata fgenesh2_kg.4__196__AT2G22750.1 I 0.841
Sb01g012250 Sorghum bicolor Sb01g012250 I 0.841
PRUPE_ppa017640mg Prunus persica PRUPE_ppa017640mg I 0.841
Sb01g009590 Sorghum bicolor Sb01g009590 I 0.841
GLYMA11G04690 Glycine max GLYMA11G04690 I 0.841
ORGLA03G0295100 Oryza glaberrima ORGLA03G0295100 I 0.841
GSMUA_Achr2G08590_001 Musa acuminata GSMUA_Achr2G08590_001 I 0.841
OMERI03G29350 Oryza meridionalis OMERI03G29350 I 0.841
GSMUA_AchrUn_randomG15440_001 Musa acuminata GSMUA_AchrUn_randomG15440_001 I 0.841
LPERR03G27220 Leersia perrieri LPERR03G27220 I 0.841
MLOC_64735 Hordeum vulgare MLOC_64735 I 0.841
OGLUM03G32210 Oryza glumaepatula OGLUM03G32210 I 0.841
GRMZM2G095899 Zea mays GRMZM2G095899 I 0.841
ONIVA03G34090 Oryza nivara ONIVA03G34090 I 0.841
ORGLA03G0268800 Oryza glaberrima ORGLA03G0268800 I 0.841
OBART03G32580 Oryza barthii OBART03G32580 I 0.841
GRMZM2G019806 Zea mays GRMZM2G019806 I 0.841
OPUNC03G29750 Oryza punctata OPUNC03G29750 I 0.841
GRMZM2G082343 Zea mays GRMZM2G082343 I 0.841
cassava16019.m1 Manihot esculenta cassava16019.m1 I 0.841
SELMODRAFT_48361 Selaginella moellendorffii SELMODRAFT_48361 I 0.841
AMTR_s00033p00078670 Amborella trichopoda AMTR_s00033p00078670 I 0.841
28179.m000478 Ricinus communis 28179.m000478 I 0.841
Cla000123 Citrullus lanatus Cla000123 I 0.841
Pm002305 Prunus mume Pm002305 I 0.841
Bra011790 Brassica rapa Bra011790 I 0.841
Pm021008 Prunus mume Pm021008 I 0.841
VIT_03s0088g01240 Vitis vinifera VIT_03s0088g01240 I 0.841
TRIUR3_29908 Triticum urartu TRIUR3_29908 I 0.841
TRIUR3_26880 Triticum urartu TRIUR3_26880 I 0.841
VIT_07s0205g00160 Vitis vinifera VIT_07s0205g00160 I 0.841
Traes_4DS_7F3D9E4D9 Triticum aestivum Traes_4DS_7F3D9E4D9 I 0.841
Si036393m.g Setaria italica Si036393m.g I 0.841
29804.m001498 Ricinus communis 29804.m001498 I 0.841
Si022171m.g Setaria italica Si022171m.g I 0.841
F775_11133 Aegilops tauschii F775_11133 I 0.841
28179.m000479 Ricinus communis 28179.m000479 I 0.841
BRADI1G10170 Brachypodium distachyon BRADI1G10170 I 0.841
Traes_4AL_F3571097B Triticum aestivum Traes_4AL_F3571097B I 0.841
TCM_000895 Theobroma cacao TCM_000895 I 0.841
Traes_4BS_34AF89ACE Triticum aestivum Traes_4BS_34AF89ACE I 0.841
Ca_02263 Cicer arietinum Ca_02263 I 0.840
Eucgr.H02390 Eucalyptus grandis Eucgr.H02390 I 0.840
Eucgr.H02389 Eucalyptus grandis Eucgr.H02389 I 0.840
MLOC_36423 Hordeum vulgare MLOC_36423 N 0.839
TRIUR3_05978 Triticum urartu TRIUR3_05978 N 0.839
F775_03506 Aegilops tauschii F775_03506 N 0.839
F775_10654 Aegilops tauschii F775_10654 N 0.839
OS03G0671800 Oryza sativa OS03G0671800 I 0.839
Traes_4DS_E4442B2FF Triticum aestivum Traes_4DS_E4442B2FF N 0.839
TRIUR3_15085 Triticum urartu TRIUR3_15085 N 0.839
MLOC_68896 Hordeum vulgare MLOC_68896 N 0.839