Solyc02g091800.2 (Solanum lycopersicum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Solyc02g091800.2 T045039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.854 0.735
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.848 0.510
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.848 0.510
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.848 0.510
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.848 0.490
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.848 0.490
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g091800.2.1 bHLH 174 222

Links

Other bHLH family TFs
Other Solanum lycopersicum TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG402030621 Solanum tuberosum PGSC0003DMG402030621 I 0.884
GLYMA05G23530 Glycine max GLYMA05G23530 I 0.875
GLYMA17G16720 Glycine max GLYMA17G16720 I 0.875
chr2.CM0021.440.nc Lotus japonicus chr2.CM0021.440.nc I 0.863
MDP0000318216 Malus domestica MDP0000318216 I 0.856
GLYMA11G04690 Glycine max GLYMA11G04690 I 0.856
orange1.1g037441m.g Citrus sinensis orange1.1g037441m.g I 0.856
Ciclev10027158m.g Citrus clementina Ciclev10027158m.g I 0.856
PDK_20s1524891g002 Phoenix dactylifera PDK_20s1524891g002 I 0.855
SELMODRAFT_34848 Selaginella moellendorffii SELMODRAFT_34848 I 0.854
SELMODRAFT_48361 Selaginella moellendorffii SELMODRAFT_48361 I 0.854
TCM_000895 Theobroma cacao TCM_000895 I 0.854
Gorai.003G034600 Gossypium raimondii Gorai.003G034600 I 0.854
Gorai.003G034700 Gossypium raimondii Gorai.003G034700 I 0.854
Si036393m.g Setaria italica Si036393m.g I 0.854
Solyc01g106460.2 Solanum lycopersicum Solyc01g106460.2 I 0.854
Ciclev10027504m.g Citrus clementina Ciclev10027504m.g I 0.854
TCM_000894 Theobroma cacao TCM_000894 I 0.854
Gorai.002G211500 Gossypium raimondii Gorai.002G211500 I 0.854
Sb01g009590 Sorghum bicolor Sb01g009590 I 0.854
Ciclev10028925m.g Citrus clementina Ciclev10028925m.g I 0.854
PRUPE_ppa017640mg Prunus persica PRUPE_ppa017640mg I 0.854
Lus10003488.g Linum usitatissimum Lus10003488.g I 0.854
PGSC0003DMG400005101 Solanum tuberosum PGSC0003DMG400005101 I 0.854
OS03G0725800 Oryza sativa OS03G0725800 I 0.854
ORUFI03G33950 Oryza rufipogon ORUFI03G33950 I 0.854
Carubv10025041m.g Capsella rubella Carubv10025041m.g I 0.854
POPTR_0001s29400 Populus trichocarpa POPTR_0001s29400 I 0.854
Gorai.007G229000 Gossypium raimondii Gorai.007G229000 I 0.854
PRUPE_ppa008130mg Prunus persica PRUPE_ppa008130mg I 0.854
POPTR_0009s08500 Populus trichocarpa POPTR_0009s08500 I 0.854
Gorai.007G228900 Gossypium raimondii Gorai.007G228900 I 0.854
POPTR_0005s09810 Populus trichocarpa POPTR_0005s09810 I 0.854
VIT_00s0824g00020 Vitis vinifera VIT_00s0824g00020 I 0.854
VIT_00s0927g00010 Vitis vinifera VIT_00s0927g00010 I 0.854
cassava35671.valid.m1 Manihot esculenta cassava35671.valid.m1 I 0.854
cassava37087.valid.m1 Manihot esculenta cassava37087.valid.m1 I 0.854
cassava20178.m1 Manihot esculenta cassava20178.m1 I 0.854
cassava18197.valid.m1 Manihot esculenta cassava18197.valid.m1 I 0.854
cassava16019.m1 Manihot esculenta cassava16019.m1 I 0.854
Cucsa.218800 Cucumis sativus Cucsa.218800 I 0.854
estExt_fgenesh1_pg.C_310143 Physcomitrella patens estExt_fgenesh1_pg.C_310143 I 0.854
Eucgr.H02398 Eucalyptus grandis Eucgr.H02398 I 0.854
Eucgr.I02518 Eucalyptus grandis Eucgr.I02518 I 0.854
Aquca_010_00012 Aquilegia coerulea Aquca_010_00012 I 0.854
evm.TU.supercontig_129.37 Carica papaya evm.TU.supercontig_129.37 I 0.854
estExt_fgenesh1_pg.C_420092 Physcomitrella patens estExt_fgenesh1_pg.C_420092 I 0.854
29804.m001498 Ricinus communis 29804.m001498 I 0.854
28179.m000479 Ricinus communis 28179.m000479 I 0.854
OPUNC03G29750 Oryza punctata OPUNC03G29750 I 0.854
gene05612-v1.0-hybrid Fragaria vesca gene05612-v1.0-hybrid I 0.854
Cagra.5392s0006 Capsella grandiflora Cagra.5392s0006 I 0.854
VIT_07s0205g00160 Vitis vinifera VIT_07s0205g00160 I 0.854
VIT_03s0088g01240 Vitis vinifera VIT_03s0088g01240 I 0.854
AMTR_s00033p00078670 Amborella trichopoda AMTR_s00033p00078670 I 0.854
gene05610-v1.0-hybrid Fragaria vesca gene05610-v1.0-hybrid I 0.854
evm.TU.supercontig_20.63 Carica papaya evm.TU.supercontig_20.63 I 0.854
28179.m000478 Ricinus communis 28179.m000478 I 0.854
Pm021008 Prunus mume Pm021008 I 0.854
Pm002305 Prunus mume Pm002305 I 0.854
Cla000123 Citrullus lanatus Cla000123 I 0.854
Eucgr.I00634 Eucalyptus grandis Eucgr.I00634 I 0.854
ORGLA03G0295100 Oryza glaberrima ORGLA03G0295100 I 0.854
orange1.1g026436m.g Citrus sinensis orange1.1g026436m.g I 0.854
GLYMA08G06831 Glycine max GLYMA08G06831 I 0.854
GLYMA07G30420 Glycine max GLYMA07G30420 I 0.854
ONIVA03G34090 Oryza nivara ONIVA03G34090 I 0.854
orange1.1g021208m.g Citrus sinensis orange1.1g021208m.g I 0.854
Bo4g150960 Brassica oleracea Bo4g150960 I 0.854
GRMZM2G082343 Zea mays GRMZM2G082343 I 0.854
GRMZM2G019806 Zea mays GRMZM2G019806 I 0.854
MDP0000502440 Malus domestica MDP0000502440 I 0.854
Pavir.J01849 Panicum virgatum Pavir.J01849 I 0.854
Pavir.J35103 Panicum virgatum Pavir.J35103 I 0.854
PK09122.1 Cannabis sativa PK09122.1 I 0.854
SapurV1A.0279s0180 Salix purpurea SapurV1A.0279s0180 I 0.854
SapurV1A.3034s0010 Salix purpurea SapurV1A.3034s0010 I 0.854
Thhalv10000426m.g Eutrema salsugineum Thhalv10000426m.g I 0.854
Bra030210 Brassica rapa Bra030210 I 0.854
Bra039924 Brassica rapa Bra039924 I 0.854
SapurV1A.0019s0910 Salix purpurea SapurV1A.0019s0910 I 0.854
fgenesh2_kg.4__196__AT2G22750.1 Arabidopsis lyrata fgenesh2_kg.4__196__AT2G22750.1 I 0.854
PK11573.1 Cannabis sativa PK11573.1 I 0.854
Bra013128 Brassica rapa Bra013128 I 0.854
GSMUA_Achr2G08590_001 Musa acuminata GSMUA_Achr2G08590_001 I 0.854
Lus10039639.g Linum usitatissimum Lus10039639.g I 0.854
MDP0000159571 Malus domestica MDP0000159571 I 0.854
GSMUA_Achr3G26180_001 Musa acuminata GSMUA_Achr3G26180_001 I 0.854
PDK_20s1394471g002 Phoenix dactylifera PDK_20s1394471g002 I 0.854
AT2G22750 Arabidopsis thaliana AT2G22750 D 0.854
OMERI03G29350 Oryza meridionalis OMERI03G29350 I 0.854
OGLUM03G32210 Oryza glumaepatula OGLUM03G32210 I 0.854
OBART03G32580 Oryza barthii OBART03G32580 I 0.854
BGIOSGA013493 Oryza indica BGIOSGA013493 I 0.854
MDP0000170202 Malus domestica MDP0000170202 I 0.854
MDP0000174149 Malus domestica MDP0000174149 I 0.854
GSMUA_Achr7G27600_001 Musa acuminata GSMUA_Achr7G27600_001 I 0.854
GSMUA_AchrUn_randomG15440_001 Musa acuminata GSMUA_AchrUn_randomG15440_001 I 0.854
GSMUA_Achr4G03160_001 Musa acuminata GSMUA_Achr4G03160_001 I 0.854
GSMUA_Achr3G30620_001 Musa acuminata GSMUA_Achr3G30620_001 I 0.854
MDP0000291132 Malus domestica MDP0000291132 I 0.854
LPERR03G27220 Leersia perrieri LPERR03G27220 I 0.854
chr2.CM0021.380.nc Lotus japonicus chr2.CM0021.380.nc I 0.853
LjT17L12.80.nd Lotus japonicus LjT17L12.80.nd I 0.851
Eucgr.H02390 Eucalyptus grandis Eucgr.H02390 I 0.851
Eucgr.H02389 Eucalyptus grandis Eucgr.H02389 I 0.851
gene07355-v1.0-hybrid Fragaria vesca gene07355-v1.0-hybrid I 0.851
Cla014288 Citrullus lanatus Cla014288 I 0.851
TCM_006357 Theobroma cacao TCM_006357 I 0.851
Lus10020503.g Linum usitatissimum Lus10020503.g I 0.851
Lus10012457.g Linum usitatissimum Lus10012457.g I 0.851
Gorai.008G087600 Gossypium raimondii Gorai.008G087600 I 0.851
chr3.LjT47G05.50.nc Lotus japonicus chr3.LjT47G05.50.nc I 0.850
chr5.CM0158.350.nd Lotus japonicus chr5.CM0158.350.nd I 0.850
chr2.CM0021.410.nc Lotus japonicus chr2.CM0021.410.nc I 0.850
Cucsa.103630 Cucumis sativus Cucsa.103630 I 0.850
SapurV1A.0151s0080 Salix purpurea SapurV1A.0151s0080 I 0.848
Thhalv10024688m.g Eutrema salsugineum Thhalv10024688m.g I 0.848
Thhalv10007075m.g Eutrema salsugineum Thhalv10007075m.g I 0.848
Carubv10028441m.g Capsella rubella Carubv10028441m.g I 0.848
MDP0000029168 Malus domestica MDP0000029168 I 0.848
MDP0000136498 Malus domestica MDP0000136498 I 0.848
Thhalv10000808m.g Eutrema salsugineum Thhalv10000808m.g I 0.848
chr2.CM0177.830.nc Lotus japonicus chr2.CM0177.830.nc I 0.848
PK18474.1 Cannabis sativa PK18474.1 D 0.848
Gorai.003G182100 Gossypium raimondii Gorai.003G182100 I 0.848
gene10501-v1.0-hybrid Fragaria vesca gene10501-v1.0-hybrid I 0.848
Ca_11514 Cicer arietinum Ca_11514 I 0.848
Bo8g028850 Brassica oleracea Bo8g028850 I 0.848
MTR_5g030430 Medicago truncatula MTR_5g030430 I 0.848
Bo9g065530 Brassica oleracea Bo9g065530 I 0.848
PGSC0003DMG400001161 Solanum tuberosum PGSC0003DMG400001161 I 0.848
PGSC0003DMG400017535 Solanum tuberosum PGSC0003DMG400017535 I 0.848
Bo5g086990 Brassica oleracea Bo5g086990 I 0.848
Bo7g075710 Brassica oleracea Bo7g075710 I 0.848
POPTR_0003s09090 Populus trichocarpa POPTR_0003s09090 I 0.848
Bra010178 Brassica rapa Bra010178 I 0.848
Bra013263 Brassica rapa Bra013263 I 0.848
GLYMA01G02251 Glycine max GLYMA01G02251 I 0.848
GLYMA01G12740 Glycine max GLYMA01G12740 I 0.848
GLYMA09G33730 Glycine max GLYMA09G33730 I 0.848
fgenesh2_kg.7__2520__AT4G17880.1 Arabidopsis lyrata fgenesh2_kg.7__2520__AT4G17880.1 I 0.848
Bra024998 Brassica rapa Bra024998 I 0.848
Bra017523 Brassica rapa Bra017523 I 0.848
Bra017527 Brassica rapa Bra017527 I 0.848
Carubv10008586m.g Capsella rubella Carubv10008586m.g I 0.848
PRUPE_ppa002404mg Prunus persica PRUPE_ppa002404mg I 0.848
ATMYC2 Arabidopsis lyrata scaffold_103634.1 I 0.848
Cagra.0751s0023 Capsella grandiflora Cagra.0751s0023 I 0.848
Bostr.3359s0090 Boechera stricta Bostr.3359s0090 I 0.848
Bostr.30275s0255 Boechera stricta Bostr.30275s0255 I 0.848
Cagra.3356s0080 Capsella grandiflora Cagra.3356s0080 I 0.848
MYC4 Arabidopsis thaliana AT4G17880 D 0.848
MYC2 Arabidopsis thaliana AT1G32640 D 0.848
Carubv10004392m.g Capsella rubella Carubv10004392m.g I 0.848
Cagra.7865s0024 Capsella grandiflora Cagra.7865s0024 I 0.848
Bostr.28243s0060 Boechera stricta Bostr.28243s0060 I 0.848
mgf002775m Mimulus guttatus mgf002775m I 0.848
Bo1g017990 Brassica oleracea Bo1g017990 I 0.848
Solyc08g076930.1 Solanum lycopersicum Solyc08g076930.1 I 0.848
scaffold_800152.1 Arabidopsis lyrata scaffold_800152.1 I 0.848
Bo01130s010 Brassica oleracea Bo01130s010 I 0.848
MYC3 Arabidopsis thaliana AT5G46760 D 0.848
Pm023237 Prunus mume Pm023237 I 0.848
Ca_12352 Cicer arietinum Ca_12352 I 0.848
GLYMA08G36720 Glycine max GLYMA08G36720 I 0.848
MTR_0246s0020 Medicago truncatula MTR_0246s0020 I 0.844
MTR_8g067280 Medicago truncatula MTR_8g067280 I 0.844
Gorai.004G184800 Gossypium raimondii Gorai.004G184800 I 0.844
MTR_0246s0050 Medicago truncatula MTR_0246s0050 I 0.844
MTR_4g098035 Medicago truncatula MTR_4g098035 I 0.844
Ca_09378 Cicer arietinum Ca_09378 I 0.843
MTR_4g097950 Medicago truncatula MTR_4g097950 I 0.843
Thhalv10025715m.g Eutrema salsugineum Thhalv10025715m.g I 0.842
Bo3g153150 Brassica oleracea Bo3g153150 I 0.842
Carubv10006834m.g Capsella rubella Carubv10006834m.g I 0.842
BHLH25 Arabidopsis thaliana AT4G37850 I 0.842
PDK_20s1611511g001 Phoenix dactylifera PDK_20s1611511g001 I 0.842
Bra010617 Brassica rapa Bra010617 I 0.842
Cagra.6066s0006 Capsella grandiflora Cagra.6066s0006 I 0.842
GSMUA_Achr8G05170_001 Musa acuminata GSMUA_Achr8G05170_001 I 0.842
Bo1g003350 Brassica oleracea Bo1g003350 I 0.842
Bra011790 Brassica rapa Bra011790 I 0.842
PDK_20s1524891g001 Phoenix dactylifera PDK_20s1524891g001 I 0.839
Ca_02264 Cicer arietinum Ca_02264 I 0.839
MTR_5g014520 Medicago truncatula MTR_5g014520 I 0.839
GSMUA_Achr7G00800_001 Musa acuminata GSMUA_Achr7G00800_001 I 0.839
GSMUA_Achr4G23070_001 Musa acuminata GSMUA_Achr4G23070_001 I 0.839
GLYMA11G04681 Glycine max GLYMA11G04681 I 0.839
SapurV1A.0821s0050 Salix purpurea SapurV1A.0821s0050 I 0.839
Lus10039640.g Linum usitatissimum Lus10039640.g I 0.839
POPTR_0007s14480 Populus trichocarpa POPTR_0007s14480 I 0.839
GLYMA01G40620 Glycine max GLYMA01G40620 I 0.839
Ca_02263 Cicer arietinum Ca_02263 I 0.839