Solyc06g083170.2 (Solanum lycopersicum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Solyc06g083170.2 T045093_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC

GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.894 0.941
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN

NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.881 0.863
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB

VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.881 0.863
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN

NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.868 0.784
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.867 0.902
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.867 0.902
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.864 0.824
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN

NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.864 0.804
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT

ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.864 0.804
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.855 0.882
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.855 0.863
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.855 0.863
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.855 0.863
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g083170.2.1 bHLH 317 367

Links

Other bHLH family TFs
Other Solanum lycopersicum TFs

806 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30198.m000869 Ricinus communis 30198.m000869 I 0.000
AMS Arabidopsis thaliana AT2G16910 D 0.000
AMS Populus trichocarpa POPTR_0009s13860 I 0.000
AMS Arabidopsis lyrata fgenesh2_kg.3__3272__AT2G16910.1 I 0.000
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.000
Aquca_018_00039 Aquilegia coerulea Aquca_018_00039 I 0.000
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.000
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.000
AT5G57150 Arabidopsis thaliana AT5G57150 N 0.000
BGIOSGA007229 Oryza indica BGIOSGA007229 I 0.000
BGIOSGA040642 Oryza indica BGIOSGA040642 N 0.000
Bo3g019430 Brassica oleracea Bo3g019430 N 0.000
Bo3g091780 Brassica oleracea Bo3g091780 I 0.000
Bo7g016210 Brassica oleracea Bo7g016210 I 0.000
Bo9g130890 Brassica oleracea Bo9g130890 N 0.000
Bostr.18351s0148 Boechera stricta Bostr.18351s0148 I 0.000
Bostr.26833s0543 Boechera stricta Bostr.26833s0543 N 0.000
Bra002004 Brassica rapa Bra002004 I 0.000
Bra002756 Brassica rapa Bra002756 N 0.000
Bra006831 Brassica rapa Bra006831 N 0.000
Bra013041 Brassica rapa Bra013041 I 0.000
Bra020462 Brassica rapa Bra020462 N 0.000
BRADI3G01901 Brachypodium distachyon BRADI3G01901 I 0.000
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.000
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N 0.000
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.000
Cagra.10862s0002 Capsella grandiflora Cagra.10862s0002 I 0.000
Cagra.1569s0024 Capsella grandiflora Cagra.1569s0024 N 0.000
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.000
Carubv10016240m.g Capsella rubella Carubv10016240m.g I 0.000
cassava2551.valid.m1 Manihot esculenta cassava2551.valid.m1 I 0.000
cassava2552.valid.m1 Manihot esculenta cassava2552.valid.m1 I 0.000
cassava2997.m1 Manihot esculenta cassava2997.m1 I 0.000
Ca_05416 Cicer arietinum Ca_05416 I 0.000
Ca_23693 Cicer arietinum Ca_23693 I 0.000
Ca_23694 Cicer arietinum Ca_23694 I 0.000
Ciclev10009285m.g Citrus clementina Ciclev10009285m.g I 0.000
Cla010249 Citrullus lanatus Cla010249 N 0.000
Cla016068 Citrullus lanatus Cla016068 I 0.000
Cla019147 Citrullus lanatus Cla019147 N 0.000
Cla023112 Citrullus lanatus Cla023112 I 0.000
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.000
Cucsa.088960 Cucumis sativus Cucsa.088960 I 0.000
Cucsa.282100 Cucumis sativus Cucsa.282100 N 0.000
Cucsa.286080 Cucumis sativus Cucsa.286080 N 0.000
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.000
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.000
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.000
Eucgr.C02208 Eucalyptus grandis Eucgr.C02208 I 0.000
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.000
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.000
evm.TU.supercontig_115.71 Carica papaya evm.TU.supercontig_115.71 N 0.000
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.000
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.000
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.000
fgenesh2_kg.8__1627__AT5G57150.1 Arabidopsis lyrata fgenesh2_kg.8__1627__AT5G57150.1 N 0.000
gene17273-v1.0-hybrid Fragaria vesca gene17273-v1.0-hybrid I 0.000
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.000
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.000
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.000
GLYMA09G06770 Glycine max GLYMA09G06770 I 0.000
GLYMA10G42830 Glycine max GLYMA10G42830 I 0.000
GLYMA13G00480 Glycine max GLYMA13G00480 I 0.000
GLYMA15G18070 Glycine max GLYMA15G18070 I 0.000
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.000
GLYMA17G06610 Glycine max GLYMA17G06610 I 0.000
GLYMA20G24170 Glycine max GLYMA20G24170 I 0.000
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I 0.000
Gorai.013G242800 Gossypium raimondii Gorai.013G242800 I 0.000
GRMZM2G042893 Zea mays GRMZM2G042893 N 0.000
GRMZM2G042895 Zea mays GRMZM2G042895 N 0.000
GRMZM2G119823 Zea mays GRMZM2G119823 I 0.000
GRMZM2G139372 Zea mays GRMZM2G139372 N 0.000
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.000
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.000
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.000
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N 0.000
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.000
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.000
LjSGA_106153.1 Lotus japonicus LjSGA_106153.1 I 0.000
LPERR04G04510 Leersia perrieri LPERR04G04510 N 0.000
LPERR04G04520 Leersia perrieri LPERR04G04520 N 0.000
Lus10006951.g Linum usitatissimum Lus10006951.g I 0.000
Lus10030880.g Linum usitatissimum Lus10030880.g N 0.000
MDP0000133262 Malus domestica MDP0000133262 I 0.000
MDP0000243628 Malus domestica MDP0000243628 I 0.000
MDP0000318229 Malus domestica MDP0000318229 I 0.000
MDP0000405748 Malus domestica MDP0000405748 I 0.000
mgf018455m Mimulus guttatus mgf018455m I 0.000
mgf019723m Mimulus guttatus mgf019723m I 0.000
mgf024029m Mimulus guttatus mgf024029m I 0.000
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.000
MLOC_62844 Hordeum vulgare MLOC_62844 N 0.000
MTR_1g112680 Medicago truncatula MTR_1g112680 I 0.000
MTR_2g038040 Medicago truncatula MTR_2g038040 I 0.000
OBART02G01550 Oryza barthii OBART02G01550 I 0.000
OGLUM02G01420 Oryza glumaepatula OGLUM02G01420 I 0.000
OMERI02G00890 Oryza meridionalis OMERI02G00890 I 0.000
OMERI03G04020 Oryza meridionalis OMERI03G04020 N 0.000
ONIVA01G07170 Oryza nivara ONIVA01G07170 N 0.000
ONIVA02G01430 Oryza nivara ONIVA02G01430 I 0.000
OPUNC04G05630 Oryza punctata OPUNC04G05630 N 0.000
orange1.1g025665m.g Citrus sinensis orange1.1g025665m.g I 0.000
ORGLA02G0014200 Oryza glaberrima ORGLA02G0014200 I 0.000
ORUFI02G01530 Oryza rufipogon ORUFI02G01530 I 0.000
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N 0.000
OS04G0301500 Oryza sativa OS04G0301500 N 0.000
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.000
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N 0.000
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N 0.000
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N 0.000
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.000
PGSC0003DMG400004087 Solanum tuberosum PGSC0003DMG400004087 I 0.000
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.000
PK03241.1 Cannabis sativa PK03241.1 I 0.000
Pm020878 Prunus mume Pm020878 N 0.000
Pm020879 Prunus mume Pm020879 I 0.000
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.000
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.000
POPTR_0018s13840 Populus trichocarpa POPTR_0018s13840 I 0.000
POPTR_0018s13860 Populus trichocarpa POPTR_0018s13860 I 0.000
PRUPE_ppa002978mg Prunus persica PRUPE_ppa002978mg I 0.000
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.000
SapurV1A.0001s2810 Salix purpurea SapurV1A.0001s2810 N 0.000
SapurV1A.0001s2820 Salix purpurea SapurV1A.0001s2820 I 0.000
SapurV1A.0140s0210 Salix purpurea SapurV1A.0140s0210 I 0.000
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.000
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.000
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.000
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.000
Sb07g004190 Sorghum bicolor Sb07g004190 N 0.000
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.000
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.000
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.000
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.000
Si006500m.g Setaria italica Si006500m.g I 0.000
Si010413m.g Setaria italica Si010413m.g N 0.000
Si010812m.g Setaria italica Si010812m.g N 0.000
Si019518m.g Setaria italica Si019518m.g I 0.000
Solyc07g018010.2 Solanum lycopersicum Solyc07g018010.2 I 0.000
TCM_006602 Theobroma cacao TCM_006602 I 0.000
TCM_039471 Theobroma cacao TCM_039471 I 0.000
TDR Oryza sativa OS02G0120500 I 0.000
Thhalv10014506m.g Eutrema salsugineum Thhalv10014506m.g N 0.000
Thhalv10022620m.g Eutrema salsugineum Thhalv10022620m.g I 0.000
Traes_2AL_411B944D6 Triticum aestivum Traes_2AL_411B944D6 N 0.000
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N 0.000
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N 0.000
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I 0.000
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I 0.000
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.000
VIT_11s0052g00100 Vitis vinifera VIT_11s0052g00100 I 0.000