Solyc10g006510.2 (Solanum lycopersicum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Solyc10g006510.2 T045129_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH34
M01704_2.00
Arabidopsis thaliana
VCACGYGH

DCRCGTGB
PBM
Weirauch et al.(2014)
pTH7212
0.883 0.731
BHLH34
M06734_2.00
Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN

NGDCACGTGBNNNNHNNDNNN
Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a
0.883 0.731
BHLH34
M06735_2.00
Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN

NNNNNNNNVCACGTGNNNNNYWY
Dap-seq
OMalley et al.(2016)
bHLH34_col
0.883 0.731
BHLH104
M01706_2.00
Arabidopsis thaliana
GGCACGTGCC

GGCACGTGCC
PBM
Weirauch et al.(2014)
pTH7365
0.842 0.654
BHLH104
M06737_2.00
Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH

DVNHSNDVHHKVCACGTGBC
Dap-seq
OMalley et al.(2016)
bHLH104_col_b
0.842 0.654
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g006510.2.1 bHLH 73 124

Links

Other bHLH family TFs
Other Solanum lycopersicum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BHLH34 Arabidopsis thaliana AT3G23210 D 0.883
BHLH104 Arabidopsis thaliana AT4G14410 D 0.842
Thhalv10021177m.g Eutrema salsugineum Thhalv10021177m.g I 0.868
Gorai.011G172500 Gossypium raimondii Gorai.011G172500 I 0.887
Carubv10005335m.g Capsella rubella Carubv10005335m.g I 0.842
Cagra.1718s0002 Capsella grandiflora Cagra.1718s0002 I 0.842
Bostr.0597s0053 Boechera stricta Bostr.0597s0053 I 0.842
VIT_14s0081g00720 Vitis vinifera VIT_14s0081g00720 I 0.852
TCM_020866 Theobroma cacao TCM_020866 I 0.852
PGSC0003DMG400019263 Solanum tuberosum PGSC0003DMG400019263 I 0.870
PGSC0003DMG400014432 Solanum tuberosum PGSC0003DMG400014432 I 0.867
bHLH104 Arabidopsis lyrata fgenesh2_kg.7__2895__AT4G14410.2 I 0.842
bHLH34 Arabidopsis lyrata fgenesh2_kg.3__2536__AT3G23210.1 I 0.883
Bra041033 Brassica rapa Bra041033 I 0.845
Thhalv10025927m.g Eutrema salsugineum Thhalv10025927m.g I 0.842
Eucgr.K00871 Eucalyptus grandis Eucgr.K00871 N 0.852