Solyc11g056650.1 (Solanum lycopersicum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Solyc11g056650.1 T045146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH

DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.857 0.843
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA

TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.857 0.843
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc11g056650.1.1 bHLH 373 423

Links

Other bHLH family TFs
Other Solanum lycopersicum TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30169.m006395 Ricinus communis 30169.m006395 I 0.000
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.000
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.000
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.000
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.000
F775_17920 Aegilops tauschii F775_17920 I 0.000
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.000
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.000
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.000
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.000
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.000
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.000
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.000
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.000
OB08G26880 Oryza brachyantha OB08G26880 I 0.000
OB09G21280 Oryza brachyantha OB09G21280 I 0.000
OBART08G19960 Oryza barthii OBART08G19960 I 0.000
OBART09G14750 Oryza barthii OBART09G14750 I 0.000
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.000
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.000
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.000
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.000
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.000
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.000
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.000
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.000
OS09G0490200 Oryza sativa OS09G0490200 D 0.000
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I 0.000
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.000
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.000
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.000
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.000
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.000
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.000
Si013426m.g Setaria italica Si013426m.g I 0.000
Si029259m.g Setaria italica Si029259m.g I 0.000
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.000
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.000
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.000
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.000
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.000
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.000