CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_036484
(
Theobroma cacao
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
TCM_036484
T045422_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.914
0.941
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.914
0.941
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.873
0.902
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY17321
bHLH
192
242
ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVEYVKYLQ
EOY17322
bHLH
192
242
ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVEYVKYLQ
EOY17323
bHLH
192
232
ATHPRSIAERVRRTRISDRIRKLQELVPNMDKITKMESFSL
EOY17324
bHLH
192
225
ATHPRSIAERVRRTRISDRIRKLQELVPNMDKAQ
EOY17325
bHLH
192
227
ATHPRSIAERVRRTRISDRIRKLQELVPNMDKVGLL
Links
Other
bHLH
family TFs
Other
Theobroma cacao
TFs
178 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy