TCM_040564 (Theobroma cacao)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 TCM_040564 T045427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH

DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.914 0.961
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN

NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.914 0.961
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.867 0.941
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY32568 bHLH 363 413
EOY32569 bHLH 361 411
EOY32570 bHLH 363 413
EOY32571 bHLH 149 199

Links

Other bHLH family TFs
Other Theobroma cacao TFs

Invalid Input OrderBy

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action