Traes_1AL_914726769 (Triticum aestivum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Traes_1AL_914726769 T045531_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PIF3
M00854_2.00
Arabidopsis thaliana
CACGTGSNN

NNSCACGTG
PBM
Franco-Zorrilla et al.(2014)
PIF3
0.879 0.673
PIF3
M00722_2.00
Arabidopsis thaliana
NCACRTN

NAYGTGN
PBM
Chang et al.(2013)
pTH8200
0.879 0.673
PK05451.1
M01120_2.00
Cannabis sativa
YCACGTGM

KCACGTGR
PBM
Lambert et al.(2019)
pTH10100
0.879 0.673
PIF3
M08045_2.00
Arabidopsis thaliana
HCACGTGGVH

DBCCACGTGD
ChIP-seq
Mathelier et al.(2014)
MA0560.1
0.879 0.673
PIF3
M09780_2.00
Arabidopsis thaliana
BDRRRVCACGTGRVSHCD

HGDSBYCACGTGBYYYHV
Transfac
Matys et al.(2006)
P$PIF3_01
0.879 0.673
PIF3
M09781_2.00
Arabidopsis thaliana
DDDVCCACGTGGVMVNB

VNBKBCCACGTGGBHHH
Transfac
Matys et al.(2006)
P$PIF3_02
0.879 0.673
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM

KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.876 0.857
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN

NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.868 0.673
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.867 0.612
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG

CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.867 0.592
PIF4
M08046_2.00
Arabidopsis thaliana
CACGTGSV

BSCACGTG
ChIP-seq
Mathelier et al.(2014)
MA0561.1
0.858 0.673
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS

SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.846 0.653
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV

BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.846 0.653
PIF1
M01703_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8733
0.845 0.633
PIF1
M08404_2.00
Arabidopsis thaliana
NCACGTGWSNYNHH

DDNRNSWCACGTGN
ChIP-chip
Mathelier et al.(2014)
MA0552.1
0.845 0.633
PIF1
M09783_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PIF1_01
0.845 0.633
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1AL_914726769.1 bHLH 263 311

Links

Other bHLH family TFs
Other Triticum aestivum TFs

548 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GATA26 Arabidopsis thaliana AT4G17570 D 0.000
GATA27 Arabidopsis thaliana AT5G47140 D 0.000
LjSGA_060304.1 Lotus japonicus LjSGA_060304.1 I 0.000
Bostr.28243s0001 Boechera stricta Bostr.28243s0001 I 0.000
Bostr.30275s0218 Boechera stricta Bostr.30275s0218 I 0.000
Cagra.3356s0048 Capsella grandiflora Cagra.3356s0048 I 0.000
Cagra.3675s0017 Capsella grandiflora Cagra.3675s0017 I 0.000
Carubv10007115m.g Capsella rubella Carubv10007115m.g I 0.000
Carubv10026597m.g Capsella rubella Carubv10026597m.g I 0.000
Aquca_082_00024 Aquilegia coerulea Aquca_082_00024 I 0.000
Aquca_053_00062 Aquilegia coerulea Aquca_053_00062 I 0.000
mgf024972m Mimulus guttatus mgf024972m I 0.000
mgf016271m Mimulus guttatus mgf016271m I 0.000
mgf015364m Mimulus guttatus mgf015364m I 0.000
estExt_fgenesh1_pg.C_4100005 Physcomitrella patens estExt_fgenesh1_pg.C_4100005 I 0.000
estExt_fgenesh1_pg.C_1220019 Physcomitrella patens estExt_fgenesh1_pg.C_1220019 I 0.000
cassava42719.valid.m1 Manihot esculenta cassava42719.valid.m1 I 0.000
27940.m000323 Ricinus communis 27940.m000323 I 0.000
Ciclev10019614m.g Citrus clementina Ciclev10019614m.g I 0.000
Eucgr.D02129 Eucalyptus grandis Eucgr.D02129 I 0.000
PK11095.1 Cannabis sativa PK11095.1 I 0.000
Thhalv10024940m.g Eutrema salsugineum Thhalv10024940m.g I 0.000
Thhalv10000871m.g Eutrema salsugineum Thhalv10000871m.g I 0.000
SapurV1A.0201s0160 Salix purpurea SapurV1A.0201s0160 I 0.000
SapurV1A.0107s0250 Salix purpurea SapurV1A.0107s0250 I 0.000
orange1.1g009155m.g Citrus sinensis orange1.1g009155m.g I 0.000
MDP0000129092 Malus domestica MDP0000129092 I 0.000
Lus10011010.g Linum usitatissimum Lus10011010.g I 0.000
Lus10011008.g Linum usitatissimum Lus10011008.g I 0.000
Lus10000587.g Linum usitatissimum Lus10000587.g I 0.000
Gorai.008G231500 Gossypium raimondii Gorai.008G231500 I 0.000
Gorai.006G214400 Gossypium raimondii Gorai.006G214400 I 0.000
Gorai.004G193200 Gossypium raimondii Gorai.004G193200 I 0.000
Gorai.003G177500 Gossypium raimondii Gorai.003G177500 I 0.000
Eucgr.E00364 Eucalyptus grandis Eucgr.E00364 I 0.000
Ca_02313 Cicer arietinum Ca_02313 I 0.000
Traes_2DL_C46B73FA3 Triticum aestivum Traes_2DL_C46B73FA3 I 0.000
GATA26 Arabidopsis lyrata fgenesh2_kg.7__2553__AT4G17570.1 I 0.000
GATA27 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000066 I 0.000
F775_19309 Aegilops tauschii F775_19309 I 0.000
BRADI5G17370 Brachypodium distachyon BRADI5G17370 I 0.000
Bra040167 Brassica rapa Bra040167 I 0.000
Bra024961 Brassica rapa Bra024961 I 0.000
Bra022107 Brassica rapa Bra022107 I 0.000
Bra021041 Brassica rapa Bra021041 I 0.000
Bra017501 Brassica rapa Bra017501 I 0.000
Bra017500 Brassica rapa Bra017500 I 0.000
Bo9g069320 Brassica oleracea Bo9g069320 I 0.000
Bo8g049560 Brassica oleracea Bo8g049560 I 0.000
Bo7g077300 Brassica oleracea Bo7g077300 I 0.000
Bo2g132210 Brassica oleracea Bo2g132210 I 0.000
Bo1g017650 Brassica oleracea Bo1g017650 I 0.000
GLYMA01G41370 Glycine max GLYMA01G41370 I 0.000
GLYMA05G05320 Glycine max GLYMA05G05320 I 0.000
Traes_2BL_4575D095D Triticum aestivum Traes_2BL_4575D095D I 0.000
Traes_2AL_01E6C08C0 Triticum aestivum Traes_2AL_01E6C08C0 I 0.000
TCM_015870 Theobroma cacao TCM_015870 I 0.000
POPTR_0003s08080 Populus trichocarpa POPTR_0003s08080 I 0.000
POPTR_0001s15170 Populus trichocarpa POPTR_0001s15170 I 0.000
MLOC_15510 Hordeum vulgare MLOC_15510 I 0.000
GSMUA_Achr8G15000_001 Musa acuminata GSMUA_Achr8G15000_001 I 0.000
GSMUA_Achr5G18290_001 Musa acuminata GSMUA_Achr5G18290_001 I 0.000
GSMUA_Achr2G18310_001 Musa acuminata GSMUA_Achr2G18310_001 I 0.000
GSMUA_Achr11G23110_001 Musa acuminata GSMUA_Achr11G23110_001 I 0.000
GSMUA_Achr11G17690_001 Musa acuminata GSMUA_Achr11G17690_001 I 0.000
GLYMA17G15610 Glycine max GLYMA17G15610 I 0.000
GLYMA11G04060 Glycine max GLYMA11G04060 I 0.000
AMTR_s00008p00092930 Amborella trichopoda AMTR_s00008p00092930 I 0.000
PGSC0003DMG400044001 Solanum tuberosum PGSC0003DMG400044001 N 0.000
GLYMA08G19681 Glycine max GLYMA08G19681 N 0.000