CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_1DS_55E91A134
(
Triticum aestivum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Traes_1DS_55E91A134
T045539_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05451.1
M01120_2.00
Cannabis sativa
YCACGTGM
KCACGTGR
PBM
Lambert et al.(2019)
pTH10100
0.901
0.939
PIF3
M00854_2.00
Arabidopsis thaliana
CACGTGSNN
NNSCACGTG
PBM
Franco-Zorrilla et al.(2014)
PIF3
0.901
0.918
PIF3
M00722_2.00
Arabidopsis thaliana
NCACRTN
NAYGTGN
PBM
Chang et al.(2013)
pTH8200
0.901
0.918
PIF3
M08045_2.00
Arabidopsis thaliana
HCACGTGGVH
DBCCACGTGD
ChIP-seq
Mathelier et al.(2014)
MA0560.1
0.901
0.918
PIF3
M09780_2.00
Arabidopsis thaliana
BDRRRVCACGTGRVSHCD
HGDSBYCACGTGBYYYHV
Transfac
Matys et al.(2006)
P$PIF3_01
0.901
0.918
PIF3
M09781_2.00
Arabidopsis thaliana
DDDVCCACGTGGVMVNB
VNBKBCCACGTGGBHHH
Transfac
Matys et al.(2006)
P$PIF3_02
0.901
0.918
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN
NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.877
0.816
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.872
0.612
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.872
0.571
PIF1
M01703_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8733
0.868
0.816
PIF1
M08404_2.00
Arabidopsis thaliana
NCACGTGWSNYNHH
DDNRNSWCACGTGN
ChIP-chip
Mathelier et al.(2014)
MA0552.1
0.868
0.816
PIF1
M09783_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PIF1_01
0.868
0.816
PIF4
M08046_2.00
Arabidopsis thaliana
CACGTGSV
BSCACGTG
ChIP-seq
Mathelier et al.(2014)
MA0561.1
0.868
0.796
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS
SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.855
0.776
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV
BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.855
0.776
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM
KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.840
0.653
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_1DS_55E91A134.2
bHLH
483
531
AEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQ
Links
Other
bHLH
family TFs
Other
Triticum aestivum
TFs
573 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL011013
Aedes aegypti
AAEL011013
I
0.000
ENSAMEG00000005588
Ailuropoda melanoleuca
ENSAMEG00000005588
N
0.000
ENSAMEG00000014765
Ailuropoda melanoleuca
ENSAMEG00000014765
N
0.000
Alligator_sinensis_CCG004879.1
Alligator sinensis
Alligator_sinensis_CCG004879.1
N
0.000
ENSAPLG00000014050
Anas platyrhynchos
ENSAPLG00000014050
N
0.000
ENSAPLG00000012534
Anas platyrhynchos
ENSAPLG00000012534
N
0.000
SIM2
Anolis carolinensis
ENSACAG00000008765
N
0.000
SIM1
Anolis carolinensis
ENSACAG00000010256
N
0.000
AALB007758
Anopheles albimanus
AALB007758
I
0.000
AALB007964
Anopheles albimanus
AALB007964
I
0.000
AARA010261
Anopheles arabiensis
AARA010261
N
0.000
AARA003714
Anopheles arabiensis
AARA003714
I
0.000
AATE009363
Anopheles atroparvus
AATE009363
I
0.000
ACHR009289
Anopheles christyi
ACHR009289
N
0.000
ACOM023265
Anopheles coluzzii
ACOM023265
I
0.000
ACOM027359
Anopheles coluzzii
ACOM027359
I
0.000
ACOM042361
Anopheles coluzzii
ACOM042361
N
0.000
ACUA010023
Anopheles culicifacies
ACUA010023
N
0.000
ACUA025040
Anopheles culicifacies
ACUA025040
I
0.000
ADAC005208
Anopheles darlingi
ADAC005208
I
0.000
ADIR001121
Anopheles dirus
ADIR001121
I
0.000
AEPI002639
Anopheles epiroticus
AEPI002639
N
0.000
AFAF010850
Anopheles farauti
AFAF010850
I
0.000
AFUN000102
Anopheles funestus
AFUN000102
I
0.000
AFUN005600
Anopheles funestus
AFUN005600
N
0.000
AGAP000773
Anopheles gambiae
AGAP000773
N
0.000
AGAP010058
Anopheles gambiae
AGAP010058
I
0.000
AMAM016994
Anopheles maculatus
AMAM016994
N
0.000
AMEC021622
Anopheles melas
AMEC021622
I
0.000
AMEC013102
Anopheles melas
AMEC013102
N
0.000
AMEM005407
Anopheles merus
AMEM005407
I
0.000
AMIN005129
Anopheles minimus
AMIN005129
N
0.000
AMIN006671
Anopheles minimus
AMIN006671
I
0.000
AQUA008255
Anopheles quadriannulatus
AQUA008255
N
0.000
AQUA009218
Anopheles quadriannulatus
AQUA009218
I
0.000
ASTEI03921
Anopheles stephensi
ASTEI03921
I
0.000
ASTEI03596
Anopheles stephensi
ASTEI03596
N
0.000
Afo_R004895
Aptenodytes forsteri
Afo_R004895
N
0.000
Afo_R003668
Aptenodytes forsteri
Afo_R003668
N
0.000
ENSAMXG00000001377
Astyanax mexicanus
ENSAMXG00000001377
N
0.000
ENSAMXG00000008897
Astyanax mexicanus
ENSAMXG00000008897
N
0.000
BGIBMGA003821
Bombyx mori
BGIBMGA003821
I
0.000
ENSP00000290399-D1
Bos grunniens
ENSP00000290399-D1
N
0.000
ENSP00000358210-D1
Bos grunniens
ENSP00000358210-D1
N
0.000
SIM1
Bos taurus
ENSBTAG00000002294
N
0.000
estExt_GenewiseH_1.C_790104
Branchiostoma floridae
estExt_GenewiseH_1.C_790104
N
0.000
Brh_R001528
Buceros rhinoceros
Brh_R001528
N
0.000
SIM1
Callithrix jacchus
ENSCJAG00000001495
N
0.000
SIM2
Callithrix jacchus
ENSCJAG00000002704
N
0.000
Aan_R007898
Calypte anna
Aan_R007898
N
0.000
Aan_R007307
Calypte anna
Aan_R007307
N
0.000
SIM2
Canis familiaris
ENSCAFG00000009686
N
0.000
SIM1
Canis familiaris
ENSCAFG00000003538
N
0.000
CapteG165634
Capitella teleta
CapteG165634
I
0.000
SIM1
Cavia porcellus
ENSCPOG00000013987
N
0.000
SIM2
Cavia porcellus
ENSCPOG00000023156
N
0.000
Cmyd_10020168
Chelonia mydas
Cmyd_10020168
N
0.000
Cmyd_10005300
Chelonia mydas
Cmyd_10005300
N
0.000
ENSCSAG00000014652
Chlorocebus sabaeus
ENSCSAG00000014652
N
0.000
ENSCSAG00000008567
Chlorocebus sabaeus
ENSCSAG00000008567
N
0.000
SIM1
Choloepus hoffmanni
ENSCHOG00000005099
N
0.000
csin104979
Clonorchis sinensis
csin104979
N
0.000
CGI_10023142
Crassostrea gigas
CGI_10023142
N
0.000
CpipJ_CPIJ009948
Culex pipiens
CpipJ_CPIJ009948
I
0.000
CPIJ009948
Culex quinquefasciatus
CPIJ009948
I
0.000
KGM_03494
Danaus plexippus
KGM_03494
I
0.000
sim1a
Danio rerio
ENSDARG00000023316
N
0.000
sim1b
Danio rerio
ENSDARG00000013789
N
0.000
DAPPUDRAFT_311851
Daphnia pulex
DAPPUDRAFT_311851
I
0.000
SIM2
Dasypus novemcinctus
ENSDNOG00000003669
N
0.000
SIM1
Dasypus novemcinctus
ENSDNOG00000010261
N
0.000
Sim2
Dipodomys ordii
ENSDORG00000011548
N
0.000
ENSDORG00000008569
Dipodomys ordii
ENSDORG00000008569
N
0.000
SIM1
Echinops telfairi
ENSETEG00000010692
N
0.000
SIM2
Echinops telfairi
ENSETEG00000012055
N
0.000
SIM2
Equus caballus
ENSECAG00000016631
N
0.000
SIM1
Equus caballus
ENSECAG00000009161
N
0.000
SIM1
Erinaceus europaeus
ENSEEUG00000009806
N
0.000
D915_00831
Fasciola hepatica
D915_00831
N
0.000
SIM1
Felis catus
ENSFCAG00000005942
N
0.000
SIM2
Felis catus
ENSFCAG00000023063
N
0.000
ENSFALG00000005247
Ficedula albicollis
ENSFALG00000005247
N
0.000
ENSGMOG00000006637
Gadus morhua
ENSGMOG00000006637
N
0.000
ENSGMOG00000018211
Gadus morhua
ENSGMOG00000018211
N
0.000
SIM1
Gallus gallus
ENSGALG00000015466
N
0.000
SIM2
Gallus gallus
ENSGALG00000016044
N
0.000
sim1b
Gasterosteus aculeatus
ENSGACG00000009479
N
0.000
sim1a
Gasterosteus aculeatus
ENSGACG00000014149
N
0.000
Gfo_R003852
Geospiza fortis
Gfo_R003852
N
0.000
Gfo_R010900
Geospiza fortis
Gfo_R010900
N
0.000
SIM1
Gorilla gorilla
ENSGGOG00000017108
N
0.000
SIM2
Gorilla gorilla
ENSGGOG00000014943
N
0.000
HMEL008134
Heliconius melpomene
HMEL008134
I
0.000
HelroG89969
Helobdella robusta
HelroG89969
N
0.000
HelroG158226
Helobdella robusta
HelroG158226
N
0.000
SIM1
Homo sapiens
ENSG00000112246
N
0.000
SIM2
Homo sapiens
ENSG00000159263
N
0.000
ENSSTOG00000027359
Ictidomys tridecemlineatus
ENSSTOG00000027359
N
0.000
ENSLACG00000012873
Latimeria chalumnae
ENSLACG00000012873
N
0.000
ENSLACG00000015924
Latimeria chalumnae
ENSLACG00000015924
N
0.000
ENSLOCG00000016561
Lepisosteus oculatus
ENSLOCG00000016561
N
0.000
ENSLOCG00000005059
Lepisosteus oculatus
ENSLOCG00000005059
N
0.000
LotgiG106747
Lottia gigantea
LotgiG106747
N
0.000
SIM1
Loxodonta africana
ENSLAFG00000006594
N
0.000
SIM2
Loxodonta africana
ENSLAFG00000000122
N
0.000
LCUP006648
Lucilia cuprina
LCUP006648
I
0.000
ENSP00000262901
Macaca fascicularis
ENSP00000262901
N
0.000
ENSP00000290399
Macaca fascicularis
ENSP00000290399
N
0.000
SIM1
Macaca mulatta
ENSMMUG00000022285
N
0.000
ENSMMUG00000015564
Macaca mulatta
ENSMMUG00000015564
N
0.000
ENSMEUG00000000606
Macropus eugenii
ENSMEUG00000000606
N
0.000
ENSMEUG00000011682
Macropus eugenii
ENSMEUG00000011682
N
0.000
SIM2
Microcebus murinus
ENSMICG00000013168
N
0.000
SIM1
Microcebus murinus
ENSMICG00000008851
N
0.000
SIM1
Monodelphis domestica
ENSMODG00000018087
N
0.000
NPAS1
Monodelphis domestica
ENSMODG00000009053
N
0.000
SIM2
Monodelphis domestica
ENSMODG00000021008
N
0.000
MDOA008891
Musca domestica
MDOA008891
I
0.000
ENSMPUG00000001668
Mustela putorius furo
ENSMPUG00000001668
N
0.000
ENSMPUG00000008240
Mustela putorius furo
ENSMPUG00000008240
N
0.000
Sim2
Mus musculus
ENSMUSG00000062713
N
0.000
Sim1
Mus musculus
ENSMUSG00000019913
N
0.000
Myotis_brandtii_SIM1_10034719
Myotis brandtii
Myotis_brandtii_SIM1_10034719
N
0.000
SIM1
Myotis lucifugus
ENSMLUG00000002874
N
0.000
NV16594
Nasonia vitripennis
NV16594
I
0.000
ENSNLEG00000013870
Nomascus leucogenys
ENSNLEG00000013870
N
0.000
ENSNLEG00000004481
Nomascus leucogenys
ENSNLEG00000004481
N
0.000
SIM1
Ochotona princeps
ENSOPRG00000013168
N
0.000
Ocbimv22031168m.g
Octopus bimaculoides
Ocbimv22031168m.g
N
0.000
Ogr12757
Ophisaurus gracilis
Ogr12757
N
0.000
T265_14441
Opisthorchis viverrini
T265_14441
N
0.000
ENSONIG00000014696
Oreochromis niloticus
ENSONIG00000014696
N
0.000
ENSONIG00000016544
Oreochromis niloticus
ENSONIG00000016544
N
0.000
SIM1
Ornithorhynchus anatinus
ENSOANG00000008943
N
0.000
SIM2
Oryctolagus cuniculus
ENSOCUG00000012903
N
0.000
SIM1
Oryctolagus cuniculus
ENSOCUG00000002759
N
0.000
SIM2
Otolemur garnettii
ENSOGAG00000028990
N
0.000
SIM1
Otolemur garnettii
ENSOGAG00000009865
N
0.000
ENSOARG00000014072
Ovis aries
ENSOARG00000014072
N
0.000
ENSOARG00000011739
Ovis aries
ENSOARG00000011739
N
0.000
SIM2
Pan troglodytes
ENSPTRG00000013894
N
0.000
SIM1
Pan troglodytes
ENSPTRG00000018447
N
0.000
ENSPANG00000011218
Papio anubis
ENSPANG00000011218
N
0.000
ENSPANG00000020491
Papio anubis
ENSPANG00000020491
N
0.000
PHUM080130
Pediculus humanus
PHUM080130
N
0.000
ENSPSIG00000002579
Pelodiscus sinensis
ENSPSIG00000002579
N
0.000
ENSPFOG00000002603
Poecilia formosa
ENSPFOG00000002603
N
0.000
Pvit_09298
Pogona vitticeps
Pvit_09298
N
0.000
Pvit_04770
Pogona vitticeps
Pvit_04770
N
0.000
ENSPPYG00000016868
Pongo abelii
ENSPPYG00000016868
N
0.000
ENSPPYG00000011405
Pongo abelii
ENSPPYG00000011405
N
0.000
SIM2
Procavia capensis
ENSPCAG00000015289
N
0.000
PXEA_0002490601
Protopolystoma xenopodis
PXEA_0002490601
N
0.000
SIM2
Pteropus vampyrus
ENSPVAG00000000853
N
0.000
SIM1
Pteropus vampyrus
ENSPVAG00000012822
N
0.000
Sim1
Rattus norvegicus
ENSRNOG00000037600
N
0.000
Sim2
Rattus norvegicus
ENSRNOG00000054203
N
0.000
RPRC001595
Rhodnius prolixus
RPRC001595
N
0.000
ENSSHAG00000016220
Sarcophilus harrisii
ENSSHAG00000016220
N
0.000
ENSSHAG00000009425
Sarcophilus harrisii
ENSSHAG00000009425
N
0.000
A_05788
Schistosoma haematobium
A_05788
N
0.000
Sjc_0126700
Schistosoma japonicum
Sjc_0126700
N
0.000
Smp_165270
Schistosoma mansoni
Smp_165270
N
0.000
SMRZ_0000943001
Schistosoma margrebowiei
SMRZ_0000943001
N
0.000
SMTD_0000610501
Schistosoma mattheei
SMTD_0000610501
N
0.000
SROB_0001806001
Schistosoma rodhaini
SROB_0001806001
N
0.000
SMU15015785
Schmidtea mediterranea
SMU15015785
N
0.000
SIM1
Sorex araneus
ENSSARG00000000736
N
0.000
SPER_0003947801
Spirometra erinaceieuropaei
SPER_0003947801
N
0.000
SMAR001482
Strigamia maritima
SMAR001482
N
0.000
SPU_013962
Strongylocentrotus purpuratus
SPU_013962
N
0.000
SIM1
Sus scrofa
ENSSSCG00000004357
N
0.000
SIM2
Taeniopygia guttata
ENSTGUG00000004856
N
0.000
SIM1
Taeniopygia guttata
ENSTGUG00000012278
N
0.000
sim1b
Takifugu rubripes
ENSTRUG00000018267
N
0.000
SIM1
Takifugu rubripes
ENSTRUG00000010040
N
0.000
ENSTSYG00000007116
Tarsius syrichta
ENSTSYG00000007116
N
0.000
ENSTSYG00000005255
Tarsius syrichta
ENSTSYG00000005255
N
0.000
tetur06g06010
Tetranychus urticae
tetur06g06010
N
0.000
sim1b
Tetraodon nigroviridis
ENSTNIG00000012304
N
0.000
ENSTNIG00000019722
Tetraodon nigroviridis
ENSTNIG00000019722
N
0.000
TRE_0000325801
Trichobilharzia regenti
TRE_0000325801
N
0.000
SIM1
Tupaia belangeri
ENSTBEG00000005949
N
0.000
SIM2
Tupaia belangeri
ENSTBEG00000011573
N
0.000
SIM1
Tursiops truncatus
ENSTTRG00000008248
N
0.000
SIM2
Tursiops truncatus
ENSTTRG00000017084
N
0.000
Tal_R009812
Tyto alba
Tal_R009812
N
0.000
SIM1
Vicugna pacos
ENSVPAG00000001407
N
0.000
sim2.S
Xenopus laevis
XB-GENE-1013959
N
0.000
XP_002941575
Xenopus tropicalis
XP_002941575
N
0.000
sim1
Xenopus tropicalis
XB-GENE-485816
N
0.000
ENSXMAG00000016785
Xiphophorus maculatus
ENSXMAG00000016785
N
0.000
ENSXMAG00000019075
Xiphophorus maculatus
ENSXMAG00000019075
N
0.000
L798_01260
Zootermopsis nevadensis
L798_01260
N
0.000