RGE1 (Vitis vinifera)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 VIT_03s0063g00170 T046159_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_03s0063g00170.t01 bHLH 93 141

Links

Other bHLH family TFs
Other Vitis vinifera TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_007083 Theobroma cacao TCM_007083 N 0.914
PRUPE_ppa022683mg Prunus persica PRUPE_ppa022683mg N 0.914
TCM_033803 Theobroma cacao TCM_033803 N 0.914
VIT_18s0001g10300 Vitis vinifera VIT_18s0001g10300 N 0.914
Gorai.002G135000 Gossypium raimondii Gorai.002G135000 N 0.914
29801.m003163 Ricinus communis 29801.m003163 N 0.914
GSMUA_Achr9G08780_001 Musa acuminata GSMUA_Achr9G08780_001 N 0.914
Pm021290 Prunus mume Pm021290 N 0.914
cassava46929.m1 Manihot esculenta cassava46929.m1 N 0.903
cassava47360.m1 Manihot esculenta cassava47360.m1 N 0.903
SapurV1A.0005s1150 Salix purpurea SapurV1A.0005s1150 N 0.894
AMTR_s00017p00226990 Amborella trichopoda AMTR_s00017p00226990 N 0.894
Ca_06466 Cicer arietinum Ca_06466 N 0.893
Pavir.J18412 Panicum virgatum Pavir.J18412 N 0.890
gene24577-v1.0-hybrid Fragaria vesca gene24577-v1.0-hybrid N 0.890
orange1.1g037241m.g Citrus sinensis orange1.1g037241m.g N 0.888
Ciclev10030106m.g Citrus clementina Ciclev10030106m.g N 0.888
POPTR_0014s02600 Populus trichocarpa POPTR_0014s02600 N 0.888
orange1.1g038084m.g Citrus sinensis orange1.1g038084m.g N 0.884
Ciclev10003973m.g Citrus clementina Ciclev10003973m.g N 0.884
SapurV1A.0643s0100 Salix purpurea SapurV1A.0643s0100 N 0.883
RGE1 Populus trichocarpa POPTR_0001s31250 N 0.883
Aquca_007_00701 Aquilegia coerulea Aquca_007_00701 N 0.879
Ca_16375 Cicer arietinum Ca_16375 N 0.872
Bo6g018390 Brassica oleracea Bo6g018390 N 0.870
BHLH95 Arabidopsis thaliana AT1G49770 N 0.870
RGE1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003696 N 0.870
Bostr.26675s0191 Boechera stricta Bostr.26675s0191 N 0.870
Cagra.2481s0020 Capsella grandiflora Cagra.2481s0020 N 0.870
Carubv10011964m.g Capsella rubella Carubv10011964m.g N 0.870
Bra018796 Brassica rapa Bra018796 N 0.870
Thhalv10012185m.g Eutrema salsugineum Thhalv10012185m.g N 0.870
Bra040671 Brassica rapa Bra040671 N 0.870
Bo5g076460 Brassica oleracea Bo5g076460 N 0.870
PRUPE_ppa018148mg Prunus persica PRUPE_ppa018148mg N 0.870
GLYMA02G11500 Glycine max GLYMA02G11500 N 0.860
Eucgr.G01493 Eucalyptus grandis Eucgr.G01493 N 0.860
Gorai.013G045100 Gossypium raimondii Gorai.013G045100 N 0.860
MDP0000484847 Malus domestica MDP0000484847 N 0.859
30170.m013700 Ricinus communis 30170.m013700 N 0.859
cassava9129.m1 Manihot esculenta cassava9129.m1 N 0.858
Solyc01g057300.1 Solanum lycopersicum Solyc01g057300.1 N 0.858
Cla016266 Citrullus lanatus Cla016266 N 0.858
Solyc01g107950.1 Solanum lycopersicum Solyc01g107950.1 N 0.858
PGSC0003DMG400025780 Solanum tuberosum PGSC0003DMG400025780 N 0.858
PGSC0003DMG400025783 Solanum tuberosum PGSC0003DMG400025783 N 0.858
Cucsa.219850 Cucumis sativus Cucsa.219850 N 0.858
Pm005302 Prunus mume Pm005302 N 0.857
SapurV1A.0423s0120 Salix purpurea SapurV1A.0423s0120 N 0.856
MDP0000713910 Malus domestica MDP0000713910 N 0.849
mgf020647m Mimulus guttatus mgf020647m N 0.849
Si009419m.g Setaria italica Si009419m.g N 0.847
evm.TU.supercontig_21.177 Carica papaya evm.TU.supercontig_21.177 N 0.846
PGSC0003DMG400025781 Solanum tuberosum PGSC0003DMG400025781 N 0.846
MTR_4g085700 Medicago truncatula MTR_4g085700 N 0.839