hlh-28 (Caenorhabditis elegans)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 WBGene00001967 T046290_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification; regulation of neurogenesis; and regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including E; Ea; Ep; MS; and MSa. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-29
M00934_2.00 		Caenorhabditis elegans
ACGCRTGK
MCAYGCGT		 PBM
Grove et al.(2009)
HLH29 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
F31A3.2 bHLH 21 71
F31A3.2 bHLH 95 152

Links

Other bHLH family TFs
Other Caenorhabditis elegans TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hlh-29 Caenorhabditis elegans WBGene00001968 D 0.914