hlh-29 (Caenorhabditis elegans)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 WBGene00001968 T046291_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification; regulation of neurogenesis; and regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including E; Ea; amphid sheath cell; ganglia; and non-striated muscle. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
hlh-29
M00934_2.00
Caenorhabditis elegans
ACGCRTGK

MCAYGCGT
PBM
Grove et al.(2009)
HLH29
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00934_2.00 bHLH 21 71
M00934_2.00 bHLH 95 152

DNA Binding Domains

Protein ID Domain From To Sequence
F31A3.4 bHLH 21 71
F31A3.4 bHLH 95 152

Links

Other bHLH family TFs
Other Caenorhabditis elegans TFs

Invalid Input OrderBy

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action