hlh-30 (Caenorhabditis elegans)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 WBGene00020930 T046306_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
hlh-30
M00937_2.00
Caenorhabditis elegans
WCACGTGA

TCACGTGW
PBM
Grove et al.(2009)
HLH30
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00937_2.00 bHLH 264 317

DNA Binding Domains

Protein ID Domain From To Sequence
W02C12.3a.1 bHLH 238 291
W02C12.3a.2 bHLH 238 291
W02C12.3b bHLH 239 292
W02C12.3c bHLH 264 317
W02C12.3d bHLH 204 257
W02C12.3e bHLH 179 232
W02C12.3f bHLH 213 266
W02C12.3g.1 bHLH 238 291
W02C12.3g.2 bHLH 238 291
W02C12.3h.1 bHLH 101 154
W02C12.3h.2 bHLH 101 154
W02C12.3h.3 bHLH 101 154

Links

Other bHLH family TFs
Other Caenorhabditis elegans TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CRE27827 Caenorhabditis remanei CRE27827 I 0.914
CBG24924 Caenorhabditis briggsae CBG24924 I 0.914
CBN07317 Caenorhabditis brenneri CBN07317 I 0.914
CBG05364 Caenorhabditis briggsae CBG05364 I 0.914
MhA1_Contig2854.frz3.gene1 Meloidogyne hapla MhA1_Contig2854.frz3.gene1 I 0.889
RSKR_0000797400 Rhabditophanes kr3021 RSKR_0000797400 I 0.889
maker-nMf.1.1.scaf11370-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf11370-augustus-gene-0.3 I 0.889
SVE_0222900 Strongyloides venezuelensis SVE_0222900 I 0.889
PTRK_0001632300 Parastrongyloides trichosuri PTRK_0001632300 I 0.889
SSTP_0000449500 Strongyloides stercoralis SSTP_0000449500 I 0.889
Minc08733 Meloidogyne incognita Minc08733 I 0.889
nAv.1.0.1.g01464 Acanthocheilonema viteae nAv.1.0.1.g01464 I 0.871
OFLC_0000747401 Onchocerca flexuosa OFLC_0000747401 I 0.871
nOo.2.0.1.g06941 Onchocerca ochengi nOo.2.0.1.g06941 I 0.871
Bm6133 Brugia malayi Bm6133 I 0.871
WUBG_15170 Wuchereria bancrofti WUBG_15170 I 0.871
EEL_0001011701 Elaeophora elaphi EEL_0001011701 I 0.871
nDi.2.2.2.g10686 Dirofilaria immitis nDi.2.2.2.g10686 I 0.871
nLs.2.1.2.g08330 Litomosoides sigmodontis nLs.2.1.2.g08330 I 0.871
WBGene00240746 Onchocerca volvulus WBGene00240746 I 0.871
TCLT_0000727601 Thelazia callipaeda TCLT_0000727601 I 0.871
BXY_0064000 Bursaphelenchus xylophilus BXY_0064000 I 0.865
scaffold257-EXSNAP2012.8 Pristionchus exspectatus scaffold257-EXSNAP2012.8 I 0.846
PEQ_0000740201 Parascaris equorum PEQ_0000740201 I 0.846
OESDEN_00871 Oesophagostomum dentatum OESDEN_00871 I 0.846
L889_g31943 Steinernema feltiae L889_g31943 I 0.846
ASIM_0001200001 Anisakis simplex ASIM_0001200001 I 0.846
ANCCEY_12664 Ancylostoma ceylanicum ANCCEY_12664 I 0.846
ACOC_0000571601 Angiostrongylus costaricensis ACOC_0000571601 I 0.846
ACAC_0001364601 Angiostrongylus cantonensis ACAC_0001364601 I 0.846
DICVIV_03673 Dictyocaulus viviparus DICVIV_03673 I 0.846
DME_0000936301 Dracunculus medinensis DME_0000936301 I 0.846
L898_g15395 Steinernema monticolum L898_g15395 I 0.846
L893_g28705 Steinernema glaseri L893_g28705 I 0.846
L892_g6408 Steinernema scapterisci L892_g6408 I 0.846
L596_g25887 Steinernema carpocapsae L596_g25887 I 0.846
NBR_0000419201 Nippostrongylus brasiliensis NBR_0000419201 I 0.846