Alligator_sinensis_CCG003524.1 (Alligator sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Alligator_sinensis_CCG003524.1 T046630_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYCN
M04128_2.00
Homo sapiens
NVCACGTGNN

NNCACGTGBN
SELEX
Yin et al.(2017)
MYCN_eDBD_HT-SELEX
0.914 1.000
MYCN
M08053_2.00
Homo sapiens
NNCCACGTGGNN

NNCCACGTGGNN
ChIP-seq
Mathelier et al.(2014)
MA0104.4
0.914 1.000
MYCN
M08727_2.00
Homo sapiens
BHSCACGTGBYB

VRVCACGTGSDV
Misc
Kulakovskiy et al.(2013)
MYCN_HUMAN.H11MO.0.A
0.914 1.000
MYCN
M09846_2.00
Homo sapiens
NNVCACGTGNHN

NDNCACGTGBNN
Transfac
Matys et al.(2006)
V$NMYC_01
0.914 1.000
MYCN
M09847_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NMYC_02
0.914 1.000
MYCN
M09848_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NMYC_Q3
0.914 1.000
Mycn
M08768_2.00
Mus musculus
MCACGYGV

BCRCGTGK
Misc
Kulakovskiy et al.(2013)
MYCN_MOUSE.H11MO.0.A
0.914 0.981
Mycn
M09476_2.00
Mus musculus
SCACGTGSNN

NNSCACGTGS
Misc
Heinz et al.(2010)
mES-nMyc_GSE11431
0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG003524.1 bHLH 500 552

Links

Other bHLH family TFs
Other Alligator sinensis TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSPPYG00000012635 Pongo abelii ENSPPYG00000012635 I 0.914
ENSPSIG00000012289 Pelodiscus sinensis ENSPSIG00000012289 I 0.914
MYCN Pan troglodytes ENSPTRG00000011672 I 0.914
MYCN Pteropus vampyrus ENSPVAG00000010355 I 0.914
ENSPANG00000019058 Papio anubis ENSPANG00000019058 I 0.914
MYCN Ochotona princeps ENSOPRG00000004369 I 0.914
ENSNLEG00000014496 Nomascus leucogenys ENSNLEG00000014496 I 0.914
MYCN Anolis carolinensis ENSACAG00000011351 I 0.914
ENSOARG00000016462 Ovis aries ENSOARG00000016462 I 0.914
ENSOCUG00000026053 Oryctolagus cuniculus ENSOCUG00000026053 I 0.914
Mycn Rattus norvegicus ENSRNOG00000051372 I 0.914
MYCN Sus scrofa ENSSSCG00000008618 I 0.914
ENSP00000281043-D1 Bos grunniens ENSP00000281043-D1 I 0.914
Myotis_brandtii_MYCN_10020172 Myotis brandtii Myotis_brandtii_MYCN_10020172 I 0.914
Pvit_07093 Pogona vitticeps Pvit_07093 I 0.914
Tal_R000146 Tyto alba Tal_R000146 I 0.914
ENSMMUP00000024750 Macaca fascicularis ENSMMUP00000024750 I 0.914
Cmyd_10010643 Chelonia mydas Cmyd_10010643 I 0.914
ENSSTOG00000012252 Ictidomys tridecemlineatus ENSSTOG00000012252 I 0.914
ENSVPAG00000007723 Vicugna pacos ENSVPAG00000007723 I 0.914
Aan_R015370 Calypte anna Aan_R015370 I 0.914
Afo_R015728 Aptenodytes forsteri Afo_R015728 I 0.914
Mycn Mus musculus ENSMUSG00000037169 D 0.914
MYCN Ornithorhynchus anatinus ENSOANG00000012832 I 0.914
ENSECAG00000002896 Equus caballus ENSECAG00000002896 I 0.914
ENSMPUG00000013620 Mustela putorius furo ENSMPUG00000013620 I 0.914
ENSFCAG00000022893 Felis catus ENSFCAG00000022893 I 0.914
MYCN Homo sapiens ENSG00000134323 D 0.914
ENSCSAG00000007889 Chlorocebus sabaeus ENSCSAG00000007889 I 0.914
ENSCAFG00000003715 Canis familiaris ENSCAFG00000003715 I 0.914
ENSAMEG00000001062 Ailuropoda melanoleuca ENSAMEG00000001062 I 0.914
ENSAPLG00000009825 Anas platyrhynchos ENSAPLG00000009825 I 0.914
ENSBTAG00000023372 Bos taurus ENSBTAG00000023372 I 0.914
MYCN Gallus gallus ENSGALG00000016462 I 0.914
ENSETEG00000007657 Echinops telfairi ENSETEG00000007657 I 0.914
ENSMGAG00000015965 Meleagris gallopavo ENSMGAG00000015965 I 0.914
ENSMEUG00000006154 Macropus eugenii ENSMEUG00000006154 I 0.914
MYCN Microcebus murinus ENSMICG00000013903 I 0.914
MYCN Loxodonta africana ENSLAFG00000015181 I 0.914
ENSMMUG00000018805 Macaca mulatta ENSMMUG00000018805 I 0.914
ENSMLUG00000026821 Myotis lucifugus ENSMLUG00000026821 I 0.914
MYCN Gorilla gorilla ENSGGOG00000005130 I 0.914
ENSSTOG00000021587 Ictidomys tridecemlineatus ENSSTOG00000021587 I 0.903
MYCN Dasypus novemcinctus ENSDNOG00000047342 I 0.902
Ogr12112 Ophisaurus gracilis Ogr12112 I 0.890
Gfo_R015246 Geospiza fortis Gfo_R015246 I 0.886
MYCN Taeniopygia guttata ENSTGUG00000013104 I 0.886
ENSFALG00000008694 Ficedula albicollis ENSFALG00000008694 I 0.886
MYCN Cavia porcellus ENSCPOG00000020263 I 0.886
Brh_R011889 Buceros rhinoceros Brh_R011889 I 0.886
MYCN Otolemur garnettii ENSOGAG00000010927 I 0.867
MYCN Tursiops truncatus ENSTTRG00000005135 I 0.858
Mycn Dipodomys ordii ENSDORG00000009906 I 0.858
ENSLACG00000008338 Latimeria chalumnae ENSLACG00000008338 I 0.841