Alligator_sinensis_CCG005947.1 (Alligator sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Alligator_sinensis_CCG005947.1 T046640_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MLX
M01114_2.00
Monodelphis domestica
NNNCACGTGN

NCACGTGNNN
PBM
Lambert et al.(2019)
pTH11463
0.868 0.964
Mlx
M00752_2.00
Mus musculus
CACGTGNNN

NNNCACGTG
PBM
Weirauch et al.(2013)
pTH2882
0.868 0.945
Mlx
M01721_2.00
Mus musculus
NCRCGTGNNN

NNNCACGYGN
PBM
Weirauch et al.(2014)
pTH5070
0.868 0.945
MLX
M02779_2.00
Homo sapiens
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2013)
MLX_1
0.868 0.945
Mlx
M02815_2.00
Mus musculus
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2013)
Mlx_1
0.868 0.945
MLX
M04080_2.00
Homo sapiens
NCACGTGN

NCACGTGN
SELEX
Yin et al.(2017)
MLX_eDBD_HT-SELEX
0.868 0.945
MLX
M04082_2.00
Homo sapiens
NVCACGTGVYN

NRBCACGTGBN
SELEX
Yin et al.(2017)
MLX_FL_HT-SELEX
0.868 0.945
MLX
M04081_2.00
Homo sapiens
NCACRTGV

BCAYGTGN
SELEX
Yin et al.(2017)
MLX_eDBD_Methyl-HT-SELEX
0.868 0.945
MLX
M04083_2.00
Homo sapiens
NDBCACRTGBV

BVCAYGTGVHN
SELEX
Yin et al.(2017)
MLX_FL_Methyl-HT-SELEX
0.868 0.945
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG005947.1 bHLH 113 171

Links

Other bHLH family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action