Alligator_sinensis_CCG011017.1 (Alligator sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Alligator_sinensis_CCG011017.1 T046652_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hey2
M01722_2.00 		Mus musculus
RCACGTGNN
NNCACGTGY		 PBM
Weirauch et al.(2014)
pTH5102 		0.870 0.906
HEY2
M02790_2.00 		Homo sapiens
GRCACGTGNV
BNCACGTGYC		 SELEX
Jolma et al.(2013)
HEY2_1 		0.870 0.906
HEY2
M02791_2.00 		Homo sapiens
GVCACGTGYN
NRCACGTGBC		 SELEX
Jolma et al.(2013)
HEY2_2 		0.870 0.906
HEY2
M04131_2.00 		Homo sapiens
NVCRCGYGVN
NBCRCGYGBN		 SELEX
Yin et al.(2017)
HEY2_eDBD_HT-SELEX 		0.870 0.906
HEY2
M04133_2.00 		Homo sapiens
NVCACGTGVN
NBCACGTGBN		 SELEX
Yin et al.(2017)
HEY2_FL_HT-SELEX 		0.870 0.906
HEY2
M04132_2.00 		Homo sapiens
NVCRCGYRVN
NBYRCGYGBN		 SELEX
Yin et al.(2017)
HEY2_eDBD_Methyl-HT-SELEX 		0.870 0.906
HEY2
M04134_2.00 		Homo sapiens
NVCRCGYGSN
NSCRCGYGBN		 SELEX
Yin et al.(2017)
HEY2_FL_Methyl-HT-SELEX 		0.870 0.906
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG011017.1 bHLH 1 54

Links

Other bHLH family TFs
Other Alligator sinensis TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10005434 Chelonia mydas Cmyd_10005434 I 0.914
HEYL Loxodonta africana ENSLAFG00000027563 I 0.914
HEYL Macaca mulatta ENSMMUG00000018861 I 0.914
ENSMPUG00000014412 Mustela putorius furo ENSMPUG00000014412 I 0.914
HEYL Gorilla gorilla ENSGGOG00000008268 I 0.914
ENSP00000361943-D1 Bos grunniens ENSP00000361943-D1 I 0.914
HEYL Equus caballus ENSECAG00000007220 I 0.914
ENSFALG00000000542 Ficedula albicollis ENSFALG00000000542 I 0.914
HEYL Homo sapiens ENSG00000163909 I 0.914
ENSP00000361943 Macaca fascicularis ENSP00000361943 I 0.914
Heyl Mus musculus ENSMUSG00000032744 I 0.914
Heyl Rattus norvegicus ENSRNOG00000015318 I 0.914
ENSPANG00000006227 Papio anubis ENSPANG00000006227 I 0.914
HEYL Pan troglodytes ENSPTRG00000000574 I 0.914
ENSPPYG00000001505 Pongo abelii ENSPPYG00000001505 I 0.914
HEYL Tursiops truncatus ENSTTRG00000014353 I 0.914
PHUM454530 Pediculus humanus PHUM454530 I 0.914
HEYL Otolemur garnettii ENSOGAG00000030877 I 0.914
HEYL Ornithorhynchus anatinus ENSOANG00000010000 I 0.914
ENSOARG00000020088 Ovis aries ENSOARG00000020088 I 0.914
HEYL Oryctolagus cuniculus ENSOCUG00000000560 I 0.914
HEYL Dasypus novemcinctus ENSDNOG00000010392 I 0.914
ENSGALG00000021593 Gallus gallus ENSGALG00000021593 I 0.914
ENSCPOG00000000704 Cavia porcellus ENSCPOG00000000704 I 0.914
ENSAPLG00000007121 Anas platyrhynchos ENSAPLG00000007121 I 0.914
PABPC4 Canis familiaris ENSCAFG00000003081 I 0.914
HEYL Bos taurus ENSBTAG00000008688 I 0.914
ENSAMEG00000011612 Ailuropoda melanoleuca ENSAMEG00000011612 I 0.914
ENSSSCG00000024651 Sus scrofa ENSSSCG00000024651 I 0.914
ENSCSAG00000001134 Chlorocebus sabaeus ENSCSAG00000001134 I 0.914
L798_14068 Zootermopsis nevadensis L798_14068 I 0.894
ENSLACG00000012215 Latimeria chalumnae ENSLACG00000012215 I 0.894
ISCW011251 Ixodes scapularis ISCW011251 I 0.894
Ocbimv22039104m.g Octopus bimaculoides Ocbimv22039104m.g I 0.894
CGI_10018323 Crassostrea gigas CGI_10018323 I 0.894
ENSSHAG00000018213 Sarcophilus harrisii ENSSHAG00000018213 I 0.890
ENSMEUG00000007444 Macropus eugenii ENSMEUG00000007444 I 0.890
HEYL Myotis lucifugus ENSMLUG00000029490 I 0.889
HEYL Felis catus ENSFCAG00000010963 I 0.884
LotgiG171867 Lottia gigantea LotgiG171867 I 0.884
ENSXMAG00000014241 Xiphophorus maculatus ENSXMAG00000014241 I 0.884
SMAR011929 Strigamia maritima SMAR011929 N 0.871
ENSPPYG00000016987 Pongo abelii ENSPPYG00000016987 I 0.870
Hey2 Mus musculus ENSMUSG00000019789 D 0.870
ENSMPUG00000014531 Mustela putorius furo ENSMPUG00000014531 I 0.870
HEY2 Bos taurus ENSBTAG00000000919 I 0.870
HEY2 Sorex araneus ENSSARG00000011755 I 0.870
ENSSTOG00000022371 Ictidomys tridecemlineatus ENSSTOG00000022371 I 0.870
HEY2 Macaca mulatta ENSMMUG00000009491 I 0.870
HEY2 Monodelphis domestica ENSMODG00000017701 I 0.870
Aan_R009606 Calypte anna Aan_R009606 I 0.870
HEY2 Taeniopygia guttata ENSTGUG00000011792 I 0.870
ENSOANG00000022119 Ornithorhynchus anatinus ENSOANG00000022119 I 0.870
HEY2 Otolemur garnettii ENSOGAG00000027812 I 0.870
HEY2 Pan troglodytes ENSPTRG00000018574 I 0.870
ENSAMEG00000009592 Ailuropoda melanoleuca ENSAMEG00000009592 I 0.870
HEY2 Anolis carolinensis ENSACAG00000001813 I 0.870
hey2 Xenopus tropicalis XB-GENE-485923 I 0.870
HEY2 Myotis lucifugus ENSMLUG00000002617 I 0.870
HEY2 Vicugna pacos ENSVPAG00000010498 I 0.870
Hey2 Rattus norvegicus ENSRNOG00000013364 I 0.870
ENSNLEG00000013972 Nomascus leucogenys ENSNLEG00000013972 I 0.870
ENSAMXG00000018013 Astyanax mexicanus ENSAMXG00000018013 I 0.870
ENSOARG00000007915 Ovis aries ENSOARG00000007915 I 0.870
ENSAPLG00000003195 Anas platyrhynchos ENSAPLG00000003195 I 0.870
Afo_R005555 Aptenodytes forsteri Afo_R005555 I 0.870
ENSFALG00000011461 Ficedula albicollis ENSFALG00000011461 I 0.870
hey2 Danio rerio ENSDARG00000013441 I 0.870
Gfo_R016187 Geospiza fortis Gfo_R016187 I 0.870
HEY2 Felis catus ENSFCAG00000026914 I 0.870
HEY2 Meleagris gallopavo ENSMGAG00000013281 I 0.870
HEY2 Homo sapiens ENSG00000135547 D 0.870
HEY2 Echinops telfairi ENSETEG00000007340 I 0.870
HEY2 Erinaceus europaeus ENSEEUG00000014040 I 0.870
HEY2 Dasypus novemcinctus ENSDNOG00000044967 I 0.870
Ogr15033 Ophisaurus gracilis Ogr15033 I 0.870
ENSDORG00000009001 Dipodomys ordii ENSDORG00000009001 I 0.870
HEY2 Cavia porcellus ENSCPOG00000021417 I 0.870
Myotis_brandtii_hey2_10035635 Myotis brandtii Myotis_brandtii_hey2_10035635 I 0.870
HEY2 Equus caballus ENSECAG00000014094 I 0.870
HEY2 Sus scrofa ENSSSCG00000004223 I 0.870
ENSSHAG00000016487 Sarcophilus harrisii ENSSHAG00000016487 I 0.870
Alligator_sinensis_CCG009102.1 Alligator sinensis Alligator_sinensis_CCG009102.1 I 0.870
HEY2 Tupaia belangeri ENSTBEG00000008836 I 0.870
HEY2 Loxodonta africana ENSLAFG00000014208 I 0.870
ENSCSAG00000016312 Chlorocebus sabaeus ENSCSAG00000016312 I 0.870
ENSLOCG00000017268 Lepisosteus oculatus ENSLOCG00000017268 I 0.870
Pvit_01735 Pogona vitticeps Pvit_01735 I 0.870
ENSLACG00000006098 Latimeria chalumnae ENSLACG00000006098 I 0.870
Brh_R011837 Buceros rhinoceros Brh_R011837 I 0.870
ENSP00000357348 Macaca fascicularis ENSP00000357348 I 0.870
ENSCAFG00000032212 Canis familiaris ENSCAFG00000032212 I 0.870
ENSPSIG00000012495 Pelodiscus sinensis ENSPSIG00000012495 I 0.870
ENSP00000357348-D1 Bos grunniens ENSP00000357348-D1 I 0.870
HEY2 Callithrix jacchus ENSCJAG00000003761 I 0.870
Cmyd_10006677 Chelonia mydas Cmyd_10006677 I 0.870
estExt_GenewiseH_1.C_4620016 Branchiostoma floridae estExt_GenewiseH_1.C_4620016 I 0.867
heyl Takifugu rubripes ENSTRUG00000003399 I 0.864
heyl Tetraodon nigroviridis ENSTNIG00000009228 I 0.864
HEY1 Tetraodon nigroviridis ENSTNIG00000018401 I 0.864
Brh_R005579 Buceros rhinoceros Brh_R005579 I 0.864
Pvit_00065 Pogona vitticeps Pvit_00065 I 0.864
Ogr14041 Ophisaurus gracilis Ogr14041 I 0.864
Sakowv30023592m.g Saccoglossus kowalevskii Sakowv30023592m.g I 0.864
LDEC001043 Leptinotarsa decemlineata LDEC001043 I 0.864
hey1.S Xenopus laevis XB-GENE-865637 I 0.864
hey1 Xenopus tropicalis XB-GENE-486694 I 0.864
Myotis_brandtii_HEY1_10021379 Myotis brandtii Myotis_brandtii_HEY1_10021379 I 0.864
Gfo_R007552 Geospiza fortis Gfo_R007552 I 0.864
SPU_009465 Strongylocentrotus purpuratus SPU_009465 I 0.864
ENSXMAG00000006950 Xiphophorus maculatus ENSXMAG00000006950 I 0.864
TC001593 Tribolium castaneum TC001593 I 0.864
tetur01g03020 Tetranychus urticae tetur01g03020 I 0.864
Afo_R005157 Aptenodytes forsteri Afo_R005157 I 0.864
YQE_09192 Dendroctonus ponderosae YQE_09192 I 0.864
HEY1 Takifugu rubripes ENSTRUG00000013573 I 0.864
ENSOARG00000008063 Ovis aries ENSOARG00000008063 I 0.864
HEY1 Gasterosteus aculeatus ENSGACG00000008712 I 0.864
heyl Gasterosteus aculeatus ENSGACG00000007492 I 0.864
hey1 Gasterosteus aculeatus ENSGACG00000003436 I 0.864
HEY1 Homo sapiens ENSG00000164683 D 0.864
HEY1 Gorilla gorilla ENSGGOG00000009960 I 0.864
ENSGMOG00000011084 Gadus morhua ENSGMOG00000011084 I 0.864
HEY1 Loxodonta africana ENSLAFG00000011488 I 0.864
ENSLACG00000015540 Latimeria chalumnae ENSLACG00000015540 I 0.864
ENSGMOG00000017811 Gadus morhua ENSGMOG00000017811 I 0.864
ENSGMOG00000013488 Gadus morhua ENSGMOG00000013488 I 0.864
HEY1 Felis catus ENSFCAG00000025542 I 0.864
ENSFALG00000008605 Ficedula albicollis ENSFALG00000008605 I 0.864
HEY1 Canis familiaris ENSCAFG00000008391 I 0.864
HEY1 Bos taurus ENSBTAG00000015717 I 0.864
ENSAMXG00000011237 Astyanax mexicanus ENSAMXG00000011237 I 0.864
CapteG228069 Capitella teleta CapteG228069 I 0.864
HEY1 Cavia porcellus ENSCPOG00000008527 I 0.864
ENSCSAG00000013410 Chlorocebus sabaeus ENSCSAG00000013410 I 0.864
HEY1 Equus caballus ENSECAG00000017010 I 0.864
HEY1 Dasypus novemcinctus ENSDNOG00000031981 I 0.864
hey1 Danio rerio ENSDARG00000070538 I 0.864
heyl Danio rerio ENSDARG00000055798 I 0.864
ENSSTOG00000023191 Ictidomys tridecemlineatus ENSSTOG00000023191 I 0.864
ENSLOCG00000001853 Lepisosteus oculatus ENSLOCG00000001853 I 0.864
ENSPFOG00000015536 Poecilia formosa ENSPFOG00000015536 I 0.864
ENSPFOG00000001913 Poecilia formosa ENSPFOG00000001913 I 0.864
ENSPANG00000018687 Papio anubis ENSPANG00000018687 I 0.864
HEY1 Monodelphis domestica ENSMODG00000006648 I 0.864
ENSPPYG00000018693 Pongo abelii ENSPPYG00000018693 I 0.864
ENSPSIG00000003791 Pelodiscus sinensis ENSPSIG00000003791 I 0.864
HEY1 Sus scrofa ENSSSCG00000006159 I 0.864
ENSSHAG00000017958 Sarcophilus harrisii ENSSHAG00000017958 I 0.864
Hey1 Rattus norvegicus ENSRNOG00000011593 I 0.864
HEY1 Oryzias latipes ENSORLG00000008268 I 0.864
heyl Oryzias latipes ENSORLG00000013651 I 0.864
HEY1 Otolemur garnettii ENSOGAG00000007210 I 0.864
Hey1 Mus musculus ENSMUSG00000040289 I 0.864
ENSNLEG00000002239 Nomascus leucogenys ENSNLEG00000002239 I 0.864
ENSMPUG00000001859 Mustela putorius furo ENSMPUG00000001859 I 0.864
ENSONIG00000003087 Oreochromis niloticus ENSONIG00000003087 I 0.864
ENSONIG00000004726 Oreochromis niloticus ENSONIG00000004726 I 0.864
hey1 Tetraodon nigroviridis ENSTNIG00000017785 I 0.861
Aqu1.218726 Amphimedon queenslandica Aqu1.218726 I 0.861
hey1 Takifugu rubripes ENSTRUG00000014561 I 0.861
ENSONIG00000018772 Oreochromis niloticus ENSONIG00000018772 I 0.842
DAPPUDRAFT_347250 Daphnia pulex DAPPUDRAFT_347250 N 0.842
SMAR012977 Strigamia maritima SMAR012977 N 0.841
CapteG182542 Capitella teleta CapteG182542 I 0.840