Alligator_sinensis_CCG022139.1 (Alligator sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Alligator_sinensis_CCG022139.1 T046693_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MAX
M00938_2.00
Homo sapiens
CCACGTGH

DCACGTGG
PBM
Guo et al.(2014)
Max_L
0.914 1.000
Max
M00121_2.00
Mus musculus
NCRCRTGNN

NNCAYGYGN
PBM
Badis et al.(2009)
Max_3863
0.914 1.000
Max
M00122_2.00
Mus musculus
NNCRCRTGN

NCAYGYGNN
PBM
Badis et al.(2009)
Max_3864
0.914 1.000
Max
M01753_2.00
Mus musculus
NCAYGYKNN

NNMRCRTGN
PBM
Weirauch et al.(2014)
pTH4381
0.914 1.000
Max
M08778_2.00
Mus musculus
VVVCACGYGSN

NSCRCGTGBBB
Misc
Kulakovskiy et al.(2013)
MAX_MOUSE.H11MO.0.A
0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG022139.1 bHLH 633 684

Links

Other bHLH family TFs
Other Alligator sinensis TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
FGRRES_08930 Fusarium graminearum FGRRES_08930 D 0.000
ACRE_087400 Acremonium chrysogenum ACRE_087400 I 0.000
NechaG25109 Fusarium solani NechaG25109 I 0.000
GLRG_04613 Colletotrichum graminicola GLRG_04613 I 0.000
FVEG_02537 Fusarium verticillioides FVEG_02537 I 0.000
FPSE_08900 Fusarium pseudograminearum FPSE_08900 I 0.000
FOXG_03663 Fusarium oxysporum FOXG_03663 I 0.000
CSUB01_08233 Colletotrichum sublineola CSUB01_08233 I 0.000
Cob_13154 Colletotrichum orbiculare Cob_13154 I 0.000
CH063_05508 Colletotrichum higginsianum CH063_05508 I 0.000
CFIO01_12289 Colletotrichum fioriniae CFIO01_12289 I 0.000
gw1.2.1520.1 Nectria haematococca gw1.2.1520.1 I 0.000