Brh_R012268 (Buceros rhinoceros)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Brh_R012268 T046737_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HIF1A
M08049_2.00
Homo sapiens
NBACGTGCNN

NNGCACGTVN
ChIP-seq
Mathelier et al.(2014)
MA1106.1
0.857 0.887
HIF1A
M08713_2.00
Homo sapiens
VDACGTGM

KCACGTHB
Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C
0.857 0.887
Hif1a
M08750_2.00
Mus musculus
VDACGTGM

KCACGTHB
Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C
0.857 0.887
HIF1A
M09454_2.00
Homo sapiens
KACGTGMN

NKCACGTM
Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352
0.857 0.887
HIF1A
M09807_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q3
0.857 0.887
HIF1A
M09808_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q5
0.857 0.887
HIF1A
M09809_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1A_Q6
0.857 0.887
HIF1A
M09810_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1_Q3
0.857 0.887
HIF1A
M09811_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIF1_Q5
0.857 0.887
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R012268 bHLH 1 53

Links

Other bHLH family TFs
Other Buceros rhinoceros TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.000
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.000
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.000
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.000
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.000
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.000
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.000
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.000
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.000
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.000
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.000
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.000
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.000
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.000
PK04210.1 Cannabis sativa PK04210.1 N 0.000
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.000
29596.m000720 Ricinus communis 29596.m000720 N 0.000
Pm004390 Prunus mume Pm004390 N 0.000
Cla022486 Citrullus lanatus Cla022486 N 0.000
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.000
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.000
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.000
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.000
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.000
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.000
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.000
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.000
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.000
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.000
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.000
TCM_034530 Theobroma cacao TCM_034530 N 0.000
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.000
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.000
Ca_14968 Cicer arietinum Ca_14968 N 0.000
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.000