CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_26916
(
Cicer arietinum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ca_26916
T046871_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.882
0.857
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.840
0.755
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.840
0.755
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_26916
bHLH
312
360
HPRSIAERVRRTRISERIKKLEGLFPKLDKQTNTADMLDLAVEYIKDLQ
Links
Other
bHLH
family TFs
Other
Cicer arietinum
TFs
157 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G16190
Glycine max
GLYMA08G16190
I
0.902
OMERI09G11370
Oryza meridionalis
OMERI09G11370
I
0.882
ONIVA08G17500
Oryza nivara
ONIVA08G17500
I
0.882
OMERI08G16700
Oryza meridionalis
OMERI08G16700
I
0.882
ONIVA08G22410
Oryza nivara
ONIVA08G22410
I
0.882
OLONG_017566
Oryza longistaminata
OLONG_017566
I
0.882
OBART08G19860
Oryza barthii
OBART08G19860
I
0.882
OBART09G14660
Oryza barthii
OBART09G14660
I
0.882
OGLUM08G21000
Oryza glumaepatula
OGLUM08G21000
I
0.882
OGLUM09G15300
Oryza glumaepatula
OGLUM09G15300
I
0.882
TRIUR3_26625
Triticum urartu
TRIUR3_26625
I
0.882
OPUNC08G18020
Oryza punctata
OPUNC08G18020
I
0.882
ORUFI08G22260
Oryza rufipogon
ORUFI08G22260
I
0.882
ORUFI09G15820
Oryza rufipogon
ORUFI09G15820
I
0.882
OS08G0506700
Oryza sativa
OS08G0506700
D
0.882
OS09G0487900
Oryza sativa
OS09G0487900
I
0.882
Traes_7AS_4FAB72487
Triticum aestivum
Traes_7AS_4FAB72487
I
0.882
ORGLA09G0112900
Oryza glaberrima
ORGLA09G0112900
I
0.882
OPUNC09G13060
Oryza punctata
OPUNC09G13060
I
0.882
Traes_7DS_B671A4EAD
Triticum aestivum
Traes_7DS_B671A4EAD
I
0.882
ORGLA08G0174800
Oryza glaberrima
ORGLA08G0174800
I
0.882
MLOC_67834
Hordeum vulgare
MLOC_67834
I
0.882
OB08G26810
Oryza brachyantha
OB08G26810
I
0.882
BGIOSGA031008
Oryza indica
BGIOSGA031008
I
0.882
F775_24151
Aegilops tauschii
F775_24151
I
0.882
BGIOSGA028963
Oryza indica
BGIOSGA028963
I
0.882
BRADI3G39927
Brachypodium distachyon
BRADI3G39927
I
0.882
GLYMA12G36750
Glycine max
GLYMA12G36750
I
0.881
MTR_3g028520
Medicago truncatula
MTR_3g028520
I
0.881
GLYMA13G27455
Glycine max
GLYMA13G27455
I
0.881
MTR_3g027650
Medicago truncatula
MTR_3g027650
I
0.881
VIT_13s0064g01290
Vitis vinifera
VIT_13s0064g01290
I
0.872
Cucsa.050160
Cucumis sativus
Cucsa.050160
I
0.872
PGSC0003DMG400025263
Solanum tuberosum
PGSC0003DMG400025263
I
0.872
POPTR_0009s06910
Populus trichocarpa
POPTR_0009s06910
I
0.872
Solyc01g086870.2
Solanum lycopersicum
Solyc01g086870.2
I
0.872
30152.m002405
Ricinus communis
30152.m002405
I
0.872
cassava29651.valid.m1
Manihot esculenta
cassava29651.valid.m1
I
0.872
SapurV1A.0027s0090
Salix purpurea
SapurV1A.0027s0090
I
0.872
gene00545-v1.0-hybrid
Fragaria vesca
gene00545-v1.0-hybrid
I
0.870
PRUPE_ppa019977mg
Prunus persica
PRUPE_ppa019977mg
I
0.870
Eucgr.A02417
Eucalyptus grandis
Eucgr.A02417
I
0.870
evm.TU.supercontig_84.89
Carica papaya
evm.TU.supercontig_84.89
I
0.870
SapurV1A.0133s0050
Salix purpurea
SapurV1A.0133s0050
I
0.870
orange1.1g018007m.g
Citrus sinensis
orange1.1g018007m.g
I
0.870
Gorai.006G140200
Gossypium raimondii
Gorai.006G140200
I
0.870
TCM_024842
Theobroma cacao
TCM_024842
I
0.870
gene20622-v1.0-hybrid
Fragaria vesca
gene20622-v1.0-hybrid
I
0.870
Solyc10g079050.1
Solanum lycopersicum
Solyc10g079050.1
I
0.870
Cucsa.242910
Cucumis sativus
Cucsa.242910
I
0.870
Pm000447
Prunus mume
Pm000447
I
0.870
cassava30692.valid.m1
Manihot esculenta
cassava30692.valid.m1
I
0.870
Lus10021023.g
Linum usitatissimum
Lus10021023.g
I
0.870
cassava2126.valid.m1
Manihot esculenta
cassava2126.valid.m1
I
0.870
29216.m000261
Ricinus communis
29216.m000261
I
0.870
Pm025821
Prunus mume
Pm025821
I
0.870
cassava35967.valid.m1
Manihot esculenta
cassava35967.valid.m1
I
0.870
cassava44054.valid.m1
Manihot esculenta
cassava44054.valid.m1
I
0.870
mgf016734m
Mimulus guttatus
mgf016734m
I
0.870
Aquca_009_00280
Aquilegia coerulea
Aquca_009_00280
I
0.870
SapurV1A.0018s0320
Salix purpurea
SapurV1A.0018s0320
I
0.870
VIT_08s0007g07810
Vitis vinifera
VIT_08s0007g07810
I
0.870
Cla017792
Citrullus lanatus
Cla017792
I
0.870
Ciclev10005233m.g
Citrus clementina
Ciclev10005233m.g
I
0.870
POPTR_0006s05640
Populus trichocarpa
POPTR_0006s05640
I
0.870
POPTR_0016s05100
Populus trichocarpa
POPTR_0016s05100
I
0.870
GLYMA10G12150
Glycine max
GLYMA10G12150
I
0.870
Gorai.002G228900
Gossypium raimondii
Gorai.002G228900
I
0.870
Lus10031826.g
Linum usitatissimum
Lus10031826.g
I
0.870
GLYMA02G29830
Glycine max
GLYMA02G29830
I
0.870
MDP0000180376
Malus domestica
MDP0000180376
I
0.870
PDK_20s1391471g001
Phoenix dactylifera
PDK_20s1391471g001
I
0.870
Lus10031255.g
Linum usitatissimum
Lus10031255.g
I
0.870
GSMUA_Achr5G22310_001
Musa acuminata
GSMUA_Achr5G22310_001
I
0.870
PK18038.1
Cannabis sativa
PK18038.1
I
0.870
PRUPE_ppa006295mg
Prunus persica
PRUPE_ppa006295mg
I
0.870
PGSC0003DMG400008153
Solanum tuberosum
PGSC0003DMG400008153
I
0.870
PDK_20s1484071g001
Phoenix dactylifera
PDK_20s1484071g001
I
0.867
PDK_20s1630671g001
Phoenix dactylifera
PDK_20s1630671g001
I
0.867
Cla015469
Citrullus lanatus
Cla015469
I
0.860
SapurV1A.0111s0030
Salix purpurea
SapurV1A.0111s0030
I
0.860
SapurV1A.1898s0040
Salix purpurea
SapurV1A.1898s0040
I
0.860
GLYMA15G42680
Glycine max
GLYMA15G42680
I
0.859
GSMUA_Achr7G20490_001
Musa acuminata
GSMUA_Achr7G20490_001
I
0.859
evm.TU.supercontig_85.115
Carica papaya
evm.TU.supercontig_85.115
I
0.857
Pavir.Ab02229
Panicum virgatum
Pavir.Ab02229
I
0.854
Pavir.Ga01365
Panicum virgatum
Pavir.Ga01365
I
0.854
Pavir.Gb01377
Panicum virgatum
Pavir.Gb01377
I
0.854
Pavir.J08536
Panicum virgatum
Pavir.J08536
I
0.854
GRMZM2G437481
Zea mays
GRMZM2G437481
I
0.854
OLONG_009256
Oryza longistaminata
OLONG_009256
I
0.854
ORUFI02G24640
Oryza rufipogon
ORUFI02G24640
I
0.854
ORGLA02G0200100
Oryza glaberrima
ORGLA02G0200100
I
0.854
Si017194m.g
Setaria italica
Si017194m.g
I
0.854
Si010513m.g
Setaria italica
Si010513m.g
I
0.854
Sb06g020810
Sorghum bicolor
Sb06g020810
I
0.854
BGIOSGA008576
Oryza indica
BGIOSGA008576
I
0.854
Sb04g025260
Sorghum bicolor
Sb04g025260
I
0.854
LPERR02G18900
Leersia perrieri
LPERR02G18900
I
0.854
OPUNC02G21170
Oryza punctata
OPUNC02G21170
I
0.854
OMERI02G22740
Oryza meridionalis
OMERI02G22740
I
0.854
OB02G30670
Oryza brachyantha
OB02G30670
I
0.854
OBART02G23210
Oryza barthii
OBART02G23210
I
0.854
ONIVA02G26110
Oryza nivara
ONIVA02G26110
I
0.854
Gorai.004G035800
Gossypium raimondii
Gorai.004G035800
I
0.851
TCM_005925
Theobroma cacao
TCM_005925
I
0.851
evm.TU.contig_45766
Carica papaya
evm.TU.contig_45766
I
0.851
POPTR_0001s27680
Populus trichocarpa
POPTR_0001s27680
I
0.848
Eucgr.J00796
Eucalyptus grandis
Eucgr.J00796
I
0.847
GSMUA_Achr3G11110_001
Musa acuminata
GSMUA_Achr3G11110_001
I
0.847
GRMZM2G417597
Zea mays
GRMZM2G417597
I
0.847
Si029614m.g
Setaria italica
Si029614m.g
I
0.847
Sb02g028300
Sorghum bicolor
Sb02g028300
I
0.847
Pavir.J14004
Panicum virgatum
Pavir.J14004
I
0.847
GRMZM2G085467
Zea mays
GRMZM2G085467
I
0.847
Pavir.Ba01718
Panicum virgatum
Pavir.Ba01718
I
0.847
Pavir.J00377
Panicum virgatum
Pavir.J00377
I
0.847
orange1.1g016638m.g
Citrus sinensis
orange1.1g016638m.g
I
0.846
gene26967-v1.0-hybrid
Fragaria vesca
gene26967-v1.0-hybrid
I
0.846
Ciclev10031622m.g
Citrus clementina
Ciclev10031622m.g
I
0.846
GSMUA_Achr6G21220_001
Musa acuminata
GSMUA_Achr6G21220_001
I
0.843
Pavir.Aa01423
Panicum virgatum
Pavir.Aa01423
I
0.843
SapurV1A.1647s0020
Salix purpurea
SapurV1A.1647s0020
I
0.840
PK06301.1
Cannabis sativa
PK06301.1
I
0.840
chr3.LjT46L11.40.nc
Lotus japonicus
chr3.LjT46L11.40.nc
N
0.840
Thhalv10028883m.g
Eutrema salsugineum
Thhalv10028883m.g
I
0.840
MDP0000269890
Malus domestica
MDP0000269890
I
0.840
SapurV1A.0391s0050
Salix purpurea
SapurV1A.0391s0050
I
0.840
SapurV1A.0690s0120
Salix purpurea
SapurV1A.0690s0120
I
0.840
orange1.1g023215m.g
Citrus sinensis
orange1.1g023215m.g
I
0.840
TCM_036484
Theobroma cacao
TCM_036484
I
0.840
PRUPE_ppa011017mg
Prunus persica
PRUPE_ppa011017mg
I
0.840
PGSC0003DMG400031314
Solanum tuberosum
PGSC0003DMG400031314
I
0.840
scaffold_103992.1
Arabidopsis lyrata
scaffold_103992.1
I
0.840
Solyc06g065040.2
Solanum lycopersicum
Solyc06g065040.2
I
0.840
BHLH80
Arabidopsis thaliana
AT1G35460
D
0.840
GLYMA08G26110
Glycine max
GLYMA08G26110
I
0.840
fgenesh2_kg.6__2924__AT4G09180.1
Arabidopsis lyrata
fgenesh2_kg.6__2924__AT4G09180.1
I
0.840
Bo6g043840
Brassica oleracea
Bo6g043840
I
0.840
BHLH81
Arabidopsis thaliana
AT4G09180
I
0.840
Bo8g026850
Brassica oleracea
Bo8g026850
I
0.840
Bra028088
Brassica rapa
Bra028088
I
0.840
Bra036760
Brassica rapa
Bra036760
I
0.840
VIT_18s0041g00690
Vitis vinifera
VIT_18s0041g00690
I
0.840
Pm004181
Prunus mume
Pm004181
I
0.840
Carubv10001721m.g
Capsella rubella
Carubv10001721m.g
I
0.840
Cagra.9781s0002
Capsella grandiflora
Cagra.9781s0002
I
0.840
Carubv10010050m.g
Capsella rubella
Carubv10010050m.g
I
0.840
Ciclev10002083m.g
Citrus clementina
Ciclev10002083m.g
I
0.840
gene26880-v1.0-hybrid
Fragaria vesca
gene26880-v1.0-hybrid
I
0.840
Cagra.18223s0002
Capsella grandiflora
Cagra.18223s0002
I
0.840
Bostr.25463s0393
Boechera stricta
Bostr.25463s0393
I
0.840
cassava13743.valid.m1
Manihot esculenta
cassava13743.valid.m1
I
0.840
Cucsa.061590
Cucumis sativus
Cucsa.061590
I
0.840
mgf002701m
Mimulus guttatus
mgf002701m
I
0.840
Bostr.1774s0027
Boechera stricta
Bostr.1774s0027
I
0.840
Gorai.013G138300
Gossypium raimondii
Gorai.013G138300
I
0.840