CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla008090
(
Citrullus lanatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cla008090
T046952_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla008090
bHLH
101
151
ATDSHSLAERVRREKINQRLRFLQDLVPGCYKTMGMAVMLDVIINYIQSLQ
Links
Other
bHLH
family TFs
Other
Citrullus lanatus
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000725991
Malus domestica
MDP0000725991
I
0.894
Bostr.12659s0424
Boechera stricta
Bostr.12659s0424
I
0.894
PRUPE_ppa010885mg
Prunus persica
PRUPE_ppa010885mg
I
0.894
Pm029081
Prunus mume
Pm029081
I
0.894
evm.TU.supercontig_65.44
Carica papaya
evm.TU.supercontig_65.44
I
0.894
orange1.1g042908m.g
Citrus sinensis
orange1.1g042908m.g
I
0.894
gene03713-v1.0-hybrid
Fragaria vesca
gene03713-v1.0-hybrid
N
0.894
Bra010993
Brassica rapa
Bra010993
I
0.894
Bo3g138670
Brassica oleracea
Bo3g138670
I
0.894
VIT_01s0011g03720
Vitis vinifera
VIT_01s0011g03720
I
0.891
mgf026269m
Mimulus guttatus
mgf026269m
N
0.891
cassava14677.m1
Manihot esculenta
cassava14677.m1
I
0.891
Solyc04g007300.2
Solanum lycopersicum
Solyc04g007300.2
I
0.891
Thhalv10008699m.g
Eutrema salsugineum
Thhalv10008699m.g
I
0.891
cassava46189.m1
Manihot esculenta
cassava46189.m1
I
0.891
BHLH75
Arabidopsis thaliana
AT1G25330
I
0.881
mgf017044m
Mimulus guttatus
mgf017044m
I
0.873
Carubv10010961m.g
Capsella rubella
Carubv10010961m.g
N
0.870
Cagra.2231s0025
Capsella grandiflora
Cagra.2231s0025
N
0.870
Aquca_041_00009
Aquilegia coerulea
Aquca_041_00009
I
0.869
chr2.CM0903.30.nd
Lotus japonicus
chr2.CM0903.30.nd
I
0.866
AMTR_s00079p00137860
Amborella trichopoda
AMTR_s00079p00137860
I
0.861
Ciclev10016461m.g
Citrus clementina
Ciclev10016461m.g
N
0.859
TCM_019445
Theobroma cacao
TCM_019445
I
0.858
Gorai.008G055400
Gossypium raimondii
Gorai.008G055400
I
0.858
SapurV1A.0315s0030
Salix purpurea
SapurV1A.0315s0030
I
0.857
SapurV1A.0101s0180
Salix purpurea
SapurV1A.0101s0180
I
0.857
SapurV1A.4333s0010
Salix purpurea
SapurV1A.4333s0010
I
0.857
SapurV1A.0781s0030
Salix purpurea
SapurV1A.0781s0030
I
0.857
POPTR_0004s09850
Populus trichocarpa
POPTR_0004s09850
I
0.857
Lus10033562.g
Linum usitatissimum
Lus10033562.g
I
0.857
cassava6194.valid.m1
Manihot esculenta
cassava6194.valid.m1
I
0.857
cassava64.valid.m1
Manihot esculenta
cassava64.valid.m1
I
0.857
Lus10017602.g
Linum usitatissimum
Lus10017602.g
I
0.857
POPTR_0005s15590
Populus trichocarpa
POPTR_0005s15590
I
0.857
27469.m000162
Ricinus communis
27469.m000162
I
0.857
30066.m000713
Ricinus communis
30066.m000713
N
0.856
Pavir.J34352
Panicum virgatum
Pavir.J34352
I
0.855
Si001242m.g
Setaria italica
Si001242m.g
I
0.855
GSMUA_Achr8G24490_001
Musa acuminata
GSMUA_Achr8G24490_001
I
0.855
GSMUA_Achr7G22770_001
Musa acuminata
GSMUA_Achr7G22770_001
I
0.855
LPERR01G36170
Leersia perrieri
LPERR01G36170
I
0.855
MLOC_43438
Hordeum vulgare
MLOC_43438
I
0.855
OBART01G41700
Oryza barthii
OBART01G41700
I
0.855
OB01G50400
Oryza brachyantha
OB01G50400
I
0.855
GSMUA_Achr7G02770_001
Musa acuminata
GSMUA_Achr7G02770_001
I
0.855
GSMUA_Achr10G28920_001
Musa acuminata
GSMUA_Achr10G28920_001
I
0.855
BRADI2G58630
Brachypodium distachyon
BRADI2G58630
I
0.855
BGIOSGA000262
Oryza indica
BGIOSGA000262
I
0.855
PDK_20s1640771g001
Phoenix dactylifera
PDK_20s1640771g001
I
0.855
GRMZM2G030762
Zea mays
GRMZM2G030762
I
0.855
GRMZM2G180406
Zea mays
GRMZM2G180406
I
0.855
TRIUR3_06081
Triticum urartu
TRIUR3_06081
I
0.855
OGLUM01G45850
Oryza glumaepatula
OGLUM01G45850
I
0.855
OS01G0915600
Oryza sativa
OS01G0915600
I
0.855
Sb03g043690
Sorghum bicolor
Sb03g043690
I
0.855
TRAES3BF069400030CFD_g
Triticum aestivum
TRAES3BF069400030CFD_g
I
0.855
ORGLA01G0356500
Oryza glaberrima
ORGLA01G0356500
I
0.855
ORUFI01G45060
Oryza rufipogon
ORUFI01G45060
I
0.855
OLONG_001206
Oryza longistaminata
OLONG_001206
I
0.855
OPUNC01G40520
Oryza punctata
OPUNC01G40520
I
0.855
OMERI01G38640
Oryza meridionalis
OMERI01G38640
I
0.855
ONIVA01G46800
Oryza nivara
ONIVA01G46800
I
0.855
SapurV1A.0719s0010
Salix purpurea
SapurV1A.0719s0010
I
0.848
SapurV1A.0530s0010
Salix purpurea
SapurV1A.0530s0010
I
0.848
Gorai.006G194500
Gossypium raimondii
Gorai.006G194500
I
0.848
SapurV1A.1621s0020
Salix purpurea
SapurV1A.1621s0020
I
0.848
MDP0000879337
Malus domestica
MDP0000879337
I
0.848
Cla019256
Citrullus lanatus
Cla019256
I
0.848
VIT_17s0000g03580
Vitis vinifera
VIT_17s0000g03580
I
0.848
Cla018783
Citrullus lanatus
Cla018783
I
0.848
Gorai.006G060400
Gossypium raimondii
Gorai.006G060400
I
0.848
TCM_012362
Theobroma cacao
TCM_012362
I
0.848
PRUPE_ppa015301mg
Prunus persica
PRUPE_ppa015301mg
I
0.848
POPTR_0012s05210
Populus trichocarpa
POPTR_0012s05210
I
0.848
POPTR_0015s03760
Populus trichocarpa
POPTR_0015s03760
I
0.848
29974.m000242
Ricinus communis
29974.m000242
I
0.848
Pm025178
Prunus mume
Pm025178
I
0.848
Cucsa.111110
Cucumis sativus
Cucsa.111110
I
0.848
Eucgr.B00731
Eucalyptus grandis
Eucgr.B00731
I
0.848
Eucgr.K02229
Eucalyptus grandis
Eucgr.K02229
I
0.848
mgf013353m
Mimulus guttatus
mgf013353m
I
0.848
GLYMA09G31580
Glycine max
GLYMA09G31580
I
0.845
GLYMA07G10311
Glycine max
GLYMA07G10311
I
0.845
Lus10009034.g
Linum usitatissimum
Lus10009034.g
I
0.845
Lus10009673.g
Linum usitatissimum
Lus10009673.g
I
0.845
evm.TU.supercontig_282.7
Carica papaya
evm.TU.supercontig_282.7
I
0.845
Ca_13025
Cicer arietinum
Ca_13025
I
0.845