Cla015469 (Citrullus lanatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cla015469 T046982_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.857 0.824
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla015469 bHLH 335 385

Links

Other bHLH family TFs
Other Citrullus lanatus TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I 0.903
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I 0.902
Cucsa.050160 Cucumis sativus Cucsa.050160 I 0.902
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.884
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.884
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.882
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.872
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.872
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.872
30152.m002405 Ricinus communis 30152.m002405 I 0.872
GLYMA08G16190 Glycine max GLYMA08G16190 I 0.872
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.872
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.872
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.869
29216.m000261 Ricinus communis 29216.m000261 I 0.869
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.869
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.869
Pm025821 Prunus mume Pm025821 I 0.869
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.869
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.869
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.869
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.869
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.869
Pm000447 Prunus mume Pm000447 I 0.869
Cla017792 Citrullus lanatus Cla017792 I 0.869
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.869
mgf016734m Mimulus guttatus mgf016734m I 0.869
MDP0000180376 Malus domestica MDP0000180376 I 0.869
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.869
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.869
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.869
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.869
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.869
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.869
PK18038.1 Cannabis sativa PK18038.1 I 0.869
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.869
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.869
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.869
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.869
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.869
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.869
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.869
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.869
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.869
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.869
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.869
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.869
TCM_024842 Theobroma cacao TCM_024842 I 0.869
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.869
GLYMA02G29830 Glycine max GLYMA02G29830 I 0.869
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.869
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.867
Si010513m.g Setaria italica Si010513m.g I 0.867
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.867
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.867
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.867
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.867
OB02G30670 Oryza brachyantha OB02G30670 I 0.867
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.867
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.867
OBART02G23210 Oryza barthii OBART02G23210 I 0.867
Si017194m.g Setaria italica Si017194m.g I 0.867
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.867
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.867
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.867
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.867
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.867
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.867
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.867
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.867
Ca_26916 Cicer arietinum Ca_26916 I 0.860
GLYMA15G42680 Glycine max GLYMA15G42680 I 0.860
mgf018372m Mimulus guttatus mgf018372m N 0.860
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.858
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.857
OBART09G14660 Oryza barthii OBART09G14660 I 0.857
OBART08G19860 Oryza barthii OBART08G19860 I 0.857
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.857
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.857
F775_24151 Aegilops tauschii F775_24151 I 0.857
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.857
OB08G26810 Oryza brachyantha OB08G26810 I 0.857
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.857
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.857
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.857
OS09G0487900 Oryza sativa OS09G0487900 I 0.857
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.857
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.857
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.857
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.857
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.857
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.857
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.857
OS08G0506700 Oryza sativa OS08G0506700 D 0.857
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.857
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.857
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.857
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.857
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.857
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.857
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.855
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.855
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.854
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.854
GLYMA12G36750 Glycine max GLYMA12G36750 I 0.852
GLYMA13G27455 Glycine max GLYMA13G27455 I 0.852
MTR_3g028520 Medicago truncatula MTR_3g028520 I 0.852
MTR_3g027650 Medicago truncatula MTR_3g027650 I 0.852
30149.m000231 Ricinus communis 30149.m000231 I 0.850
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.850
TCM_005925 Theobroma cacao TCM_005925 I 0.850
evm.TU.contig_45766 Carica papaya evm.TU.contig_45766 I 0.850
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.850
Bo4g019620 Brassica oleracea Bo4g019620 I 0.846
Bo3g036400 Brassica oleracea Bo3g036400 I 0.846
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.846
Bra004748 Brassica rapa Bra004748 I 0.846
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.846
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.846
Bra000291 Brassica rapa Bra000291 I 0.846
PK07850.1 Cannabis sativa PK07850.1 I 0.846
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.846
Pm007619 Prunus mume Pm007619 I 0.846
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.846
mgf005043m Mimulus guttatus mgf005043m I 0.846
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.846
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.846
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.846
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.846
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.846
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.846
MDP0000273574 Malus domestica MDP0000273574 I 0.846
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.846
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.846
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.846
TCM_020066 Theobroma cacao TCM_020066 I 0.846
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.846
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.845
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.845
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.845
chr3.LjT46L11.40.nc Lotus japonicus chr3.LjT46L11.40.nc N 0.841
Eucgr.G03396 Eucalyptus grandis Eucgr.G03396 I 0.839
MDP0000214472 Malus domestica MDP0000214472 N 0.838