TF Information

Cmyd_10000422 *(Chelonia mydas)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00010 (HLH)	IPR001092	Cmyd_10000422	T047040_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
USF2 M04076_2.00	Homo sapiens	NVCACGTGVCN	NGBCACGTGBN	SELEX Yin et al.(2017) USF2_eDBD_HT-SELEX	0.889	0.981
USF2 M08050_2.00	Homo sapiens	NNVYCACGTGACHNNN	NNNDGTCACGTGRBNN	ChIP-seq Mathelier et al.(2014) MA0526.2	0.889	0.981
USF2 M07785_2.00	Homo sapiens	NGTCACGTGRBSVVV	BBBSVYCACGTGACN	ChIP-seq Gerstein et al.(2012) GM12878_USF2_Stanford	0.889	0.981
USF2 M07786_2.00	Homo sapiens	NVGTCACGTGRBSVVV	BBBSVYCACGTGACBN	ChIP-seq Gerstein et al.(2012) H1-hESC_USF2_Stanford	0.889	0.981
USF2 M07787_2.00	Homo sapiens	RGTCACGTGVB	VBCACGTGACY	ChIP-seq Gerstein et al.(2012) HeLa-S3_USF2_Stanford	0.889	0.981
USF2 M07788_2.00	Homo sapiens	NGTCACGTGRBSV	BSVYCACGTGACN	ChIP-seq Gerstein et al.(2012) HepG2_USF2_Stanford	0.889	0.981
USF2 M07789_2.00	Homo sapiens	RGTCACGTGRBSV	BSVYCACGTGACY	ChIP-seq Gerstein et al.(2012) K562_USF2_Stanford	0.889	0.981
USF2 M08715_2.00	Homo sapiens	NVGTCACGTGVBSVNNVNB	VNBNNBSVBCACGTGACBN	Misc Kulakovskiy et al.(2013) USF2_HUMAN.H11MO.0.A	0.889	0.981
USF2 M09812_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$USF2_01	0.889	0.981
USF2 M09813_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$USF2_02	0.889	0.981
USF2 M09814_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$USF2_Q6_01	0.889	0.981
USF2 M09815_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$USF2_Q6	0.889	0.981
USF2 M04077_2.00	Homo sapiens	VNCAYGTGACN	NGTCACRTGNB	SELEX Yin et al.(2017) USF2_eDBD_Methyl-HT-SELEX	0.889	0.981
Usf2 M01752_2.00	Mus musculus	NNCACGTGAN	NTCACGTGNN	PBM Weirauch et al.(2014) pTH5265	0.846	0.963
Usf2 M08777_2.00	Mus musculus	NVGTCACGTGVBSVNNVNB	VNBNNBSVBCACGTGACBN	Misc Kulakovskiy et al.(2013) USF2_MOUSE.H11MO.0.A	0.846	0.963
Usf2 M09479_2.00	Mus musculus	NNCAYGTGVY	RBCACRTGNN	Misc Heinz et al.(2010) C2C12-Usf2_GSE36030	0.846	0.963
For this family, TFs with SR scores > 0.838* will likely have a similar motif*