CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10010636
(
Chelonia mydas
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cmyd_10010636
T047085_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MSGN1
M04144_2.00
Homo sapiens
NVMCAWWTGGYN
NRCCAWWTGKBN
SELEX
Yin et al.(2017)
MSGN1_eDBD_HT-SELEX
0.847
0.979
Msgn1
M08772_2.00
Mus musculus
NNRMCAAATGGY
RCCATTTGKYNN
Misc
Kulakovskiy et al.(2013)
MSGN1_MOUSE.H11MO.0.C
0.847
0.979
MSGN1
M04145_2.00
Homo sapiens
NRMCAWWTGSYN
NRSCAWWTGKYN
SELEX
Yin et al.(2017)
MSGN1_eDBD_Methyl-HT-SELEX
0.847
0.979
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10010636
bHLH
431
478
RRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTT
Links
Other
bHLH
family TFs
Other
Chelonia mydas
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy