ENSBTAP00000018956-D1 (Bos grunniens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 ENSBTAP00000018956-D1 T047142_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Srebf2
M01725_2.00
Mus musculus
TSRCGTGA

TCACGYSA
PBM
Weirauch et al.(2014)
pTH4327
0.914 1.000
SREBF2
M02811_2.00
Homo sapiens
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2013)
SREBF2_1
0.914 1.000
SREBF2
M03591_2.00
Homo sapiens
NRTCACVCCAYH

DRTGGBGTGAYN
SELEX
Nitta et al.(2015)
SREBF2_1
0.914 1.000
SREBF2
M04219_2.00
Homo sapiens
RTCACGCCAY

RTGGCGTGAY
SELEX
Yin et al.(2017)
SREBF2_eDBD_HT-SELEX_1
0.914 1.000
SREBF2
M04220_2.00
Homo sapiens
ATCACGTGAY

RTCACGTGAT
SELEX
Yin et al.(2017)
SREBF2_eDBD_HT-SELEX_2
0.914 1.000
SREBF2
M08059_2.00
Homo sapiens
RTCACVCCAB

VTGGBGTGAY
ChIP-seq
Mathelier et al.(2014)
MA0596.1
0.914 1.000
SREBF2
M08741_2.00
Homo sapiens
NNYCWSBCCABBB

VVVTGGVSWGRNN
Misc
Kulakovskiy et al.(2013)
SRBP2_HUMAN.H11MO.0.B
0.914 1.000
Srebf2
M08752_2.00
Mus musculus
NNYCWSBCCABBB

VVVTGGVSWGRNN
Misc
Kulakovskiy et al.(2013)
SRBP2_MOUSE.H11MO.0.B
0.914 1.000
SREBF2
M09462_2.00
Homo sapiens
MNRTCACVCCAC

GTGGBGTGAYNK
Misc
Heinz et al.(2010)
HepG2-Srebp2_GSE31477
0.914 1.000
SREBF2
M09882_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP2_Q6_01
0.914 1.000
SREBF2
M09883_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP2_Q6
0.914 1.000
SREBF2
M04221_2.00
Homo sapiens
RTCACVCCAY

RTGGBGTGAY
SELEX
Yin et al.(2017)
SREBF2_eDBD_Methyl-HT-SELEX_1
0.914 1.000
SREBF2
M04222_2.00
Homo sapiens
RTCACSTGAY

RTCASGTGAY
SELEX
Yin et al.(2017)
SREBF2_eDBD_Methyl-HT-SELEX_2
0.914 1.000
SREBF1
M04062_2.00
Homo sapiens
VHCACVCSAY

RTSGBGTGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1
0.862 0.804
SREBF1
M04063_2.00
Homo sapiens
VHCRCGYGDB

VHCRCGYGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2
0.862 0.804
SREBF1
M08048_2.00
Homo sapiens
VTCACSCCAY

RTGGSGTGAB
ChIP-seq
Mathelier et al.(2014)
MA0595.1
0.862 0.804
SREBF1
M08711_2.00
Homo sapiens
VTCACVYSAYH

DRTSRBGTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A
0.862 0.804
SREBF1
M09796_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBF1_02
0.862 0.804
SREBF1
M09797_2.00
Homo sapiens
NATCACGTGAB

VTCACGTGATN
Transfac
Matys et al.(2006)
V$SREBP1_01
0.862 0.804
SREBF1
M09798_2.00
Homo sapiens
KRTCACCCCAC

GTGGGGTGAYM
Transfac
Matys et al.(2006)
V$SREBP1_02
0.862 0.804
SREBF1
M09799_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q5
0.862 0.804
SREBF1
M09800_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6_01
0.862 0.804
SREBF1
M09801_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6
0.862 0.804
SREBF1
M04064_2.00
Homo sapiens
MTCACVCCAY

RTGGBGTGAK
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1
0.862 0.804
SREBF1
M04065_2.00
Homo sapiens
RTCACCTGAY

RTCAGGTGAY
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2
0.862 0.804
Srebf1
M00754_2.00
Mus musculus
VWCAYVYSAB

VTSRBRTGWB
PBM
Weirauch et al.(2013)
pTH0914
0.862 0.784
Srebf1
M01724_2.00
Mus musculus
RWCAYVYBD

HVRBRTGWY
PBM
Weirauch et al.(2014)
pTH5161
0.862 0.784
Srebf1
M02816_2.00
Mus musculus
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2013)
Srebf1_1
0.862 0.784
Srebf1
M08749_2.00
Mus musculus
VTCASSYSABN

NVTSRSSTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B
0.862 0.784
HLH106
M03626_2.00
Drosophila melanogaster
RTCACGTGAY

RTCACGTGAY
SELEX
Nitta et al.(2015)
HLH106_1
0.838 0.647
HLH106
M03627_2.00
Drosophila melanogaster
NRTCACGCCAYH

DRTGGCGTGAYN
SELEX
Nitta et al.(2015)
HLH106_2
0.838 0.647
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000018956-D1 bHLH 188 238

Links

Other bHLH family TFs
Other Bos grunniens TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29797.m000353 Ricinus communis 29797.m000353 N 0.000
29830.m001415 Ricinus communis 29830.m001415 N 0.000
Aquca_015_00469 Aquilegia coerulea Aquca_015_00469 N 0.000
anac036 Arabidopsis thaliana AT2G17040 N 0.000
BGIOSGA011514 Oryza indica BGIOSGA011514 N 0.000
Bo3g092020 Brassica oleracea Bo3g092020 N 0.000
Bo7g015050 Brassica oleracea Bo7g015050 N 0.000
Bo9g024360 Brassica oleracea Bo9g024360 N 0.000
Bostr.18351s0165 Boechera stricta Bostr.18351s0165 N 0.000
Bra002018 Brassica rapa Bra002018 N 0.000
Bra013034 Brassica rapa Bra013034 N 0.000
Bra037283 Brassica rapa Bra037283 N 0.000
Cagra.0805s0005 Capsella grandiflora Cagra.0805s0005 N 0.000
Carubv10014350m.g Capsella rubella Carubv10014350m.g N 0.000
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N 0.000
cassava23439.valid.m1 Manihot esculenta cassava23439.valid.m1 I 0.000
cassava30341.valid.m1 Manihot esculenta cassava30341.valid.m1 N 0.000
Ca_11128 Cicer arietinum Ca_11128 N 0.000
chr3.CM0460.350.nd Lotus japonicus chr3.CM0460.350.nd N 0.000
Ciclev10029007m.g Citrus clementina Ciclev10029007m.g N 0.000
Cla007018 Citrullus lanatus Cla007018 N 0.000
Cucsa.119310 Cucumis sativus Cucsa.119310 N 0.000
Eucgr.I01494 Eucalyptus grandis Eucgr.I01494 N 0.000
evm.TU.supercontig_320.2 Carica papaya evm.TU.supercontig_320.2 N 0.000
anac036 Arabidopsis lyrata fgenesh2_kg.3__3291__AT2G17040.1 N 0.000
gene17203-v1.0-hybrid Fragaria vesca gene17203-v1.0-hybrid N 0.000
GLYMA11G10230 Glycine max GLYMA11G10230 N 0.000
GLYMA12G02540 Glycine max GLYMA12G02540 N 0.000
Gorai.002G001900 Gossypium raimondii Gorai.002G001900 N 0.000
Gorai.003G003900 Gossypium raimondii Gorai.003G003900 N 0.000
Gorai.005G257800 Gossypium raimondii Gorai.005G257800 N 0.000
Gorai.008G038800 Gossypium raimondii Gorai.008G038800 N 0.000
GRMZM2G126817 Zea mays GRMZM2G126817 N 0.000
LPERR03G02450 Leersia perrieri LPERR03G02450 N 0.000
Lus10003333.g Linum usitatissimum Lus10003333.g N 0.000
MDP0000480581 Malus domestica MDP0000480581 N 0.000
MDP0000868556 Malus domestica MDP0000868556 N 0.000
mgf013168m Mimulus guttatus mgf013168m N 0.000
MTR_4g075980 Medicago truncatula MTR_4g075980 N 0.000
OBART03G02620 Oryza barthii OBART03G02620 N 0.000
OBART03G02630 Oryza barthii OBART03G02630 N 0.000
OGLUM03G02560 Oryza glumaepatula OGLUM03G02560 N 0.000
OLONG_016677 Oryza longistaminata OLONG_016677 N 0.000
OMERI03G02480 Oryza meridionalis OMERI03G02480 N 0.000
ONIVA03G02250 Oryza nivara ONIVA03G02250 N 0.000
orange1.1g023427m.g Citrus sinensis orange1.1g023427m.g N 0.000
ORGLA03G0024300 Oryza glaberrima ORGLA03G0024300 N 0.000
ORUFI03G02380 Oryza rufipogon ORUFI03G02380 N 0.000
OS03G0133000 Oryza sativa OS03G0133000 N 0.000
Pm020961 Prunus mume Pm020961 N 0.000
POPTR_0004s18860 Populus trichocarpa POPTR_0004s18860 N 0.000
POPTR_0005s10610 Populus trichocarpa POPTR_0005s10610 I 0.000
POPTR_0009s14370 Populus trichocarpa POPTR_0009s14370 N 0.000
SapurV1A.0080s0480 Salix purpurea SapurV1A.0080s0480 N 0.000
SapurV1A.0218s0020 Salix purpurea SapurV1A.0218s0020 N 0.000
SapurV1A.0958s0170 Salix purpurea SapurV1A.0958s0170 I 0.000
Sb01g048130 Sorghum bicolor Sb01g048130 N 0.000
TCM_006499 Theobroma cacao TCM_006499 N 0.000
Thhalv10022800m.g Eutrema salsugineum Thhalv10022800m.g N 0.000
anac036 Vitis vinifera VIT_03s0038g03410 N 0.000
VIT_04s0008g00150 Vitis vinifera VIT_04s0008g00150 N 0.000