CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000302189
(
Macaca fascicularis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
ENSP00000302189
T047218_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NHLH1
M02796_2.00
Homo sapiens
CGCAGCTGCB
VGCAGCTGCG
SELEX
Jolma et al.(2013)
NHLH1_1
0.914
1.000
NHLH1
M02797_2.00
Homo sapiens
VGCAGCTGCK
MGCAGCTGCB
SELEX
Jolma et al.(2013)
NHLH1_2
0.914
1.000
NHLH1
M04162_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH
DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_eDBD_HT-SELEX
0.914
1.000
NHLH1
M04164_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH
DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_FL_HT-SELEX
0.914
1.000
Nhlh1
M08773_2.00
Mus musculus
BKGGNMNCAGCTGCGBCCYY
RRGGVCGCAGCTGNKNCCMV
Misc
Kulakovskiy et al.(2013)
HEN1_MOUSE.H11MO.0.C
0.914
1.000
NHLH1
M09875_2.00
Homo sapiens
NNDGGNMVCAGCTGVGNCCNNN
NNNGGNCBCAGCTGBKNCCHNN
Transfac
Matys et al.(2006)
V$HEN1_01
0.914
1.000
NHLH1
M09876_2.00
Homo sapiens
NDRGGVMGCAGCTGMKNCCHHN
NDDGGNMKCAGCTGCKBCCYHN
Transfac
Matys et al.(2006)
V$HEN1_02
0.914
1.000
NHLH1
M04163_2.00
Homo sapiens
NRGBMKCAGCTGCGYCCH
DGGRCGCAGCTGMKVCYN
SELEX
Yin et al.(2017)
NHLH1_eDBD_Methyl-HT-SELEX
0.914
1.000
NHLH1
M04165_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH
DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH1_FL_Methyl-HT-SELEX
0.914
1.000
Nhlh2
M00756_2.00
Mus musculus
NKCAGCTGHN
NDCAGCTGMN
PBM
Weirauch et al.(2013)
pTH3037
0.914
0.981
NHLH2
M04177_2.00
Homo sapiens
DDGNMGCAGCTGCGYCMH
DKGRCGCAGCTGCKNCHH
SELEX
Yin et al.(2017)
NHLH2_FL_HT-SELEX
0.914
0.981
NHLH2
M09878_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEN2_Q2
0.914
0.981
NHLH2
M04178_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH
DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH2_FL_Methyl-HT-SELEX
0.914
0.981
HLH4C
M03609_2.00
Drosophila melanogaster
DDNCRCAGCTGYGNHH
DDNCRCAGCTGYGNHH
SELEX
Nitta et al.(2015)
HLH4C_1
0.891
0.923
HLH4C
M03610_2.00
Drosophila melanogaster
DRSMYCAGCTGVKSYH
DRSMBCAGCTGRKSYH
SELEX
Nitta et al.(2015)
HLH4C_2
0.891
0.923
HLH4C
M03611_2.00
Drosophila melanogaster
NRBMYCAGCTGYGNHH
DDNCRCAGCTGRKVYN
SELEX
Nitta et al.(2015)
HLH4C_3
0.891
0.923
HLH4C
M05963_2.00
Drosophila melanogaster
CACCTGMDCC
GGHKCAGGTG
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_3_FBgn0011277
0.891
0.923
HLH4C
M05964_2.00
Drosophila melanogaster
MCAYCTGMGMMM
KKKCKCAGRTGK
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_4_FBgn0011277
0.891
0.923
HLH4C
M05965_2.00
Drosophila melanogaster
VNHHVCACCTGMBNC
GNVKCAGGTGBDDNB
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_FBgn0011277
0.891
0.923
HLH4C
M05966_2.00
Drosophila melanogaster
RGSMYCAGCTGCGYY
RRCGCAGCTGRKSCY
B1H
Zhu et al.(2011)
HLH4C_SANGER_5_FBgn0011277
0.891
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000302189
bHLH
76
128
YRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLN
Links
Other
bHLH
family TFs
Other
Macaca fascicularis
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_001610
Acremonium chrysogenum
ACRE_001610
N
0.000
CCM_01786
Cordyceps militaris
CCM_01786
N
0.000
CPUR_04923
Claviceps purpurea
CPUR_04923
N
0.000
FFUJ_03219
Fusarium fujikuroi
FFUJ_03219
N
0.000
FGRRES_07243
Fusarium graminearum
FGRRES_07243
N
0.000
FOXG_02174
Fusarium oxysporum
FOXG_02174
N
0.000
FPSE_00192
Fusarium pseudograminearum
FPSE_00192
N
0.000
FVEG_05341
Fusarium verticillioides
FVEG_05341
N
0.000
gw1.3.1452.1
Nectria haematococca
gw1.3.1452.1
N
0.000
MAC_08651
Metarhizium acridum
MAC_08651
N
0.000
MAJ_01159
Metarhizium majus
MAJ_01159
N
0.000
MAM_02403
Metarhizium album
MAM_02403
N
0.000
MANI_008576
Metarhizium anisopliae
MANI_008576
N
0.000
MBR_01178
Metarhizium brunneum
MBR_01178
N
0.000
MGU_01854
Metarhizium guizhouense
MGU_01854
N
0.000
OCS_02929
Ophiocordyceps sinensis
OCS_02929
N
0.000
S40285_01213
Stachybotrys chlorohalonata
S40285_01213
N
0.000
S40288_05241
Stachybotrys chartarum
S40288_05241
N
0.000
TRIATDRAFT_164783
Trichoderma atroviride
TRIATDRAFT_164783
N
0.000
TRIREDRAFT_57756
Trichoderma reesei
TRIREDRAFT_57756
N
0.000
TRIVIDRAFT_12894
Trichoderma virens
TRIVIDRAFT_12894
N
0.000
UV8b_7435
Ustilaginoidea virens
UV8b_7435
N
0.000
VHEMI05316
Torrubiella hemipterigena
VHEMI05316
N
0.000
X797_001665
Metarhizium robertsii
X797_001665
N
0.000