Gfo_R002785 (Geospiza fortis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gfo_R002785 T047307_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Twist2
M01718_2.00
Mus musculus
NACATATGKN

NMCATATGTN
PBM
Weirauch et al.(2014)
pTH5033
0.777 1.000
TWIST1
M08052_2.00
Homo sapiens
NNNCCAGATGTNN

NNACATCTGGNNN
ChIP-seq
Mathelier et al.(2014)
MA1123.1
0.777 1.000
TWIST1
M08722_2.00
Homo sapiens
WAATBRRWWMCAGATGB

VCATCTGKWWYYVATTW
Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A
0.777 1.000
Twist1
M08766_2.00
Mus musculus
WAATNRRWWMCAKMTGB

VCAKMTGKWWYYNATTW
Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B
0.777 1.000
TWIST1
M09831_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6_01
0.777 1.000
TWIST1
M09832_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6
0.777 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R002785 bHLH 1 41

Links

Other bHLH family TFs
Other Geospiza fortis TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R001044 Calypte anna Aan_R001044 I 0.777
Aan_R002857 Calypte anna Aan_R002857 I 0.777
Afo_R010658 Aptenodytes forsteri Afo_R010658 I 0.777
Alligator_sinensis_CCG002585.1 Alligator sinensis Alligator_sinensis_CCG002585.1 I 0.777
Alligator_sinensis_CCG008488.1 Alligator sinensis Alligator_sinensis_CCG008488.1 I 0.777
Brh_R012765 Buceros rhinoceros Brh_R012765 I 0.777
CLEC011700 Cimex lectularius CLEC011700 I 0.777
Cmyd_10006750 Chelonia mydas Cmyd_10006750 I 0.777
twist1 Anolis carolinensis ENSACAG00000011825 I 0.777
ENSAMEG00000008556 Ailuropoda melanoleuca ENSAMEG00000008556 I 0.777
ENSAMEG00000020165 Ailuropoda melanoleuca ENSAMEG00000020165 I 0.777
ENSAPLG00000000878 Anas platyrhynchos ENSAPLG00000000878 I 0.777
TWIST2 Bos taurus ENSBTAG00000021444 I 0.777
TWIST1 Bos taurus ENSBTAG00000046922 I 0.777
TWIST2 Canis familiaris ENSCAFG00000012469 I 0.777
TWIST2 Callithrix jacchus ENSCJAG00000023006 I 0.777
TWIST2 Cavia porcellus ENSCPOG00000025980 I 0.777
ENSCSAG00000018801 Chlorocebus sabaeus ENSCSAG00000018801 I 0.777
ENSCSAG00000019610 Chlorocebus sabaeus ENSCSAG00000019610 I 0.777
TWIST2 Dasypus novemcinctus ENSDNOG00000002434 I 0.777
TWIST1 Dasypus novemcinctus ENSDNOG00000037354 I 0.777
ENSDORG00000012866 Dipodomys ordii ENSDORG00000012866 I 0.777
TWIST1 Erinaceus europaeus ENSEEUG00000015333 I 0.777
TWIST2 Echinops telfairi ENSETEG00000009809 I 0.777
ENSETEG00000013115 Echinops telfairi ENSETEG00000013115 I 0.777
ENSFALG00000009781 Ficedula albicollis ENSFALG00000009781 I 0.777
ENSFALG00000014990 Ficedula albicollis ENSFALG00000014990 I 0.777
TWIST1 Homo sapiens ENSG00000122691 D 0.777
TWIST2 Homo sapiens ENSG00000233608 I 0.777
ENSGALG00000004274 Gallus gallus ENSGALG00000004274 I 0.777
ENSGALG00000026059 Gallus gallus ENSGALG00000026059 I 0.777
ENSLACG00000012096 Latimeria chalumnae ENSLACG00000012096 I 0.777
ENSLACG00000013366 Latimeria chalumnae ENSLACG00000013366 I 0.777
TWIST2 Loxodonta africana ENSLAFG00000032174 I 0.777
ENSLOCG00000018350 Lepisosteus oculatus ENSLOCG00000018350 I 0.777
ENSMEUG00000013853 Macropus eugenii ENSMEUG00000013853 I 0.777
ENSMGAG00000002218 Meleagris gallopavo ENSMGAG00000002218 I 0.777
TWIST1 Myotis lucifugus ENSMLUG00000007047 I 0.777
TWIST2 Myotis lucifugus ENSMLUG00000023316 I 0.777
TWIST1 Macaca mulatta ENSMMUG00000011173 I 0.777
TWIST2 Macaca mulatta ENSMMUG00000021909 I 0.777
ENSMMUP00000014629 Macaca fascicularis ENSMMUP00000014629 I 0.605
ENSMODG00000001412 Monodelphis domestica ENSMODG00000001412 I 0.777
TWIST1 Monodelphis domestica ENSMODG00000023924 I 0.777
ENSMPUG00000019429 Mustela putorius furo ENSMPUG00000019429 I 0.777
Twist2 Mus musculus ENSMUSG00000007805 D 0.777
Twist1 Mus musculus ENSMUSG00000035799 D 0.777
ENSNLEG00000011342 Nomascus leucogenys ENSNLEG00000011342 I 0.777
ENSNLEG00000019264 Nomascus leucogenys ENSNLEG00000019264 I 0.777
TWIST1 Ornithorhynchus anatinus ENSOANG00000009614 I 0.777
ENSOANG00000012950 Ornithorhynchus anatinus ENSOANG00000012950 I 0.777
ENSOARG00000000265 Ovis aries ENSOARG00000000265 I 0.777
ENSOARG00000009754 Ovis aries ENSOARG00000009754 I 0.777
TWIST2 Oryctolagus cuniculus ENSOCUG00000004073 I 0.777
TWIST2 Otolemur garnettii ENSOGAG00000029007 I 0.777
ENSP00000405176-D1 Bos grunniens ENSP00000405176-D1 I 0.777
ENSPANG00000001578 Papio anubis ENSPANG00000001578 I 0.777
ENSPMAG00000010415 Petromyzon marinus ENSPMAG00000010415 N 0.903
ENSPPYG00000017754 Pongo abelii ENSPPYG00000017754 I 0.777
ENSPSIG00000012843 Pelodiscus sinensis ENSPSIG00000012843 I 0.777
ENSPTRG00000018960 Pan troglodytes ENSPTRG00000018960 I 0.777
TWIST2 Pan troglodytes ENSPTRG00000033910 I 0.777
TWIST1 Pteropus vampyrus ENSPVAG00000001710 I 0.777
Twist1 Rattus norvegicus ENSRNOG00000011101 I 0.777
Twist2 Rattus norvegicus ENSRNOG00000020355 I 0.777
ENSSHAG00000003328 Sarcophilus harrisii ENSSHAG00000003328 I 0.777
TWIST1 Sus scrofa ENSSSCG00000015370 I 0.777
TWIST2 Sus scrofa ENSSSCG00000016343 I 0.777
ENSSTOG00000004633 Ictidomys tridecemlineatus ENSSTOG00000004633 I 0.777
TWIST1 Taeniopygia guttata ENSTGUG00000002643 I 0.777
ENSTGUG00000003194 Taeniopygia guttata ENSTGUG00000003194 I 0.777
Gfo_R012065 Geospiza fortis Gfo_R012065 I 0.777
Myotis_brandtii_Twist1_10031742 Myotis brandtii Myotis_brandtii_Twist1_10031742 I 0.777
Myotis_brandtii_Twist2_10035125 Myotis brandtii Myotis_brandtii_Twist2_10035125 N 0.914
Ogr06591 Ophisaurus gracilis Ogr06591 I 0.777
Ogr11552 Ophisaurus gracilis Ogr11552 I 0.777
Ogr11553 Ophisaurus gracilis Ogr11553 I 0.777
Pvit_02271 Pogona vitticeps Pvit_02271 I 0.777
Tal_R010363 Tyto alba Tal_R010363 N 0.849