Gfo_R002785 (Geospiza fortis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gfo_R002785 T047307_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Twist2
M01718_2.00
Mus musculus
NACATATGKN

NMCATATGTN
PBM
Weirauch et al.(2014)
pTH5033
0.777 1.000
TWIST1
M08052_2.00
Homo sapiens
NNNCCAGATGTNN

NNACATCTGGNNN
ChIP-seq
Mathelier et al.(2014)
MA1123.1
0.777 1.000
TWIST1
M08722_2.00
Homo sapiens
WAATBRRWWMCAGATGB

VCATCTGKWWYYVATTW
Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A
0.777 1.000
Twist1
M08766_2.00
Mus musculus
WAATNRRWWMCAKMTGB

VCAKMTGKWWYYNATTW
Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B
0.777 1.000
TWIST1
M09831_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6_01
0.777 1.000
TWIST1
M09832_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6
0.777 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R002785 bHLH 1 41

Links

Other bHLH family TFs
Other Geospiza fortis TFs

Invalid Input OrderBy

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action