Gfo_R002789 (Geospiza fortis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gfo_R002789 T047308_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ahr
M08747_2.00 		Mus musculus
DCACGCNMH
DKNGCGTGH		 Misc
Kulakovskiy et al.(2013)
AHR_MOUSE.H11MO.0.B 		0.894 0.957
AHR
M08716_2.00 		Homo sapiens
DCACGCNMH
DKNGCGTGH		 Misc
Kulakovskiy et al.(2013)
AHR_HUMAN.H11MO.0.B 		0.894 0.936
AHR
M09816_2.00 		Homo sapiens
WSTCACGCDASYYBGRRS
SYYCVRRSTHGCGTGASW		 Transfac
Matys et al.(2006)
V$AHR_01 		0.894 0.936
AHR
M09817_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AHR_Q5 		0.894 0.936
AHR
M09818_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AHR_Q6_01 		0.894 0.936
AHR
M09819_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AHR_Q6 		0.894 0.936
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R002789 bHLH 12 58

Links

Other bHLH family TFs
Other Geospiza fortis TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001040 Calypte anna Aan_R001040 I 0.914
ENSPSIG00000010051 Pelodiscus sinensis ENSPSIG00000010051 I 0.914
ENSMGAG00000010174 Meleagris gallopavo ENSMGAG00000010174 I 0.914
Afo_R003471 Aptenodytes forsteri Afo_R003471 I 0.914
ENSGALG00000010836 Gallus gallus ENSGALG00000010836 I 0.914
ENSTGUG00000002585 Taeniopygia guttata ENSTGUG00000002585 I 0.914
ENSAPLG00000008769 Anas platyrhynchos ENSAPLG00000008769 I 0.914
Tal_R011867 Tyto alba Tal_R011867 I 0.914
Ahr Rattus norvegicus ENSRNOG00000004342 I 0.894
ENSSARG00000001961 Sorex araneus ENSSARG00000001961 I 0.894
ENSPPYG00000017758 Pongo abelii ENSPPYG00000017758 I 0.894
AHR Oryctolagus cuniculus ENSOCUG00000003877 I 0.894
ENSPCAG00000006894 Procavia capensis ENSPCAG00000006894 I 0.894
ENSSHAG00000001563 Sarcophilus harrisii ENSSHAG00000001563 I 0.894
AHR Pan troglodytes ENSPTRG00000018955 I 0.894
ENSSTOG00000003086 Ictidomys tridecemlineatus ENSSTOG00000003086 I 0.894
ENSVPAG00000008443 Vicugna pacos ENSVPAG00000008443 I 0.894
ENSP00000385642 Macaca fascicularis ENSP00000385642 I 0.894
Myotis_brandtii_AHR_10031750 Myotis brandtii Myotis_brandtii_AHR_10031750 I 0.894
ENSTTRG00000006913 Tursiops truncatus ENSTTRG00000006913 I 0.894
ENSTSYG00000010830 Tarsius syrichta ENSTSYG00000010830 I 0.894
AHR Sus scrofa ENSSSCG00000030484 I 0.894
ENSOARG00000009234 Ovis aries ENSOARG00000009234 I 0.894
ENSTBEG00000007210 Tupaia belangeri ENSTBEG00000007210 I 0.894
ENSSSCG00000015364 Sus scrofa ENSSSCG00000015364 I 0.894
ENSPANG00000002444 Papio anubis ENSPANG00000002444 I 0.894
Ahr Dipodomys ordii ENSDORG00000007750 I 0.894
Ahr Mus musculus ENSMUSG00000019256 D 0.894
AHR Homo sapiens ENSG00000106546 D 0.894
ENSGGOG00000011367 Gorilla gorilla ENSGGOG00000011367 I 0.894
ENSCSAG00000013508 Chlorocebus sabaeus ENSCSAG00000013508 I 0.894
ENSCPOG00000005481 Cavia porcellus ENSCPOG00000005481 I 0.894
ENSAMEG00000010559 Ailuropoda melanoleuca ENSAMEG00000010559 I 0.894
ENSCAFG00000002448 Canis familiaris ENSCAFG00000002448 I 0.894
ENSCJAG00000001029 Callithrix jacchus ENSCJAG00000001029 I 0.894
ENSLACG00000002803 Latimeria chalumnae ENSLACG00000002803 I 0.894
ENSETEG00000019660 Echinops telfairi ENSETEG00000019660 I 0.894
ENSMODG00000001528 Monodelphis domestica ENSMODG00000001528 I 0.894
ENSMPUG00000013964 Mustela putorius furo ENSMPUG00000013964 I 0.894
ENSMLUG00000000097 Myotis lucifugus ENSMLUG00000000097 I 0.894
ENSMMUG00000012203 Macaca mulatta ENSMMUG00000012203 I 0.894
ENSLAFG00000015328 Loxodonta africana ENSLAFG00000015328 I 0.894
ahr1b Gasterosteus aculeatus ENSGACG00000015615 I 0.881
ENSDNOG00000003198 Dasypus novemcinctus ENSDNOG00000003198 I 0.866
ENSOGAG00000012656 Otolemur garnettii ENSOGAG00000012656 I 0.866
ENSPVAG00000002167 Pteropus vampyrus ENSPVAG00000002167 I 0.866
PXEA_0000742401 Protopolystoma xenopodis PXEA_0000742401 I 0.864
ENSOPRG00000010358 Ochotona princeps ENSOPRG00000010358 I 0.862
BGLB005801 Biomphalaria glabrata BGLB005801 I 0.844
SMU15013078 Schmidtea mediterranea SMU15013078 I 0.844
CGI_10012885 Crassostrea gigas CGI_10012885 I 0.844
SMU15033026 Schmidtea mediterranea SMU15033026 I 0.844
LotgiG117861 Lottia gigantea LotgiG117861 I 0.844
CapteG145851 Capitella teleta CapteG145851 I 0.844
ENSLOCG00000013271 Lepisosteus oculatus ENSLOCG00000013271 N 0.840
ahrr Takifugu rubripes ENSTRUG00000003745 N 0.840
ENSLACG00000012651 Latimeria chalumnae ENSLACG00000012651 N 0.840
Pvit_18498 Pogona vitticeps Pvit_18498 N 0.840
XP_002161735.1 Hydra magnipapillata XP_002161735.1 I 0.838