Gfo_R012737 (Geospiza fortis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gfo_R012737 T047350_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mnt
M01716_2.00
Mus musculus
NCACGTGNN

NNCACGTGN
PBM
Weirauch et al.(2014)
pTH4588
0.893 0.962
MNT
M02774_2.00
Homo sapiens
NVCACGTGNH

DNCACGTGBN
SELEX
Jolma et al.(2013)
MNT_1
0.893 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R012737 bHLH 73 124

Links

Other bHLH family TFs
Other Geospiza fortis TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MNT Gallus gallus ENSGALG00000005830 I 0.914
ENSGMOG00000011558 Gadus morhua ENSGMOG00000011558 I 0.914
MNT Gasterosteus aculeatus ENSGACG00000008790 I 0.914
ENSFALG00000004754 Ficedula albicollis ENSFALG00000004754 I 0.914
MNT Danio rerio ENSDARG00000101859 I 0.914
ENSLACG00000018117 Latimeria chalumnae ENSLACG00000018117 I 0.914
ENSPSIG00000013581 Pelodiscus sinensis ENSPSIG00000013581 I 0.914
MNT Monodelphis domestica ENSMODG00000010713 I 0.914
ENSPFOG00000015158 Poecilia formosa ENSPFOG00000015158 I 0.914
MNT Meleagris gallopavo ENSMGAG00000008592 I 0.914
ENSMEUG00000015884 Macropus eugenii ENSMEUG00000015884 I 0.914
ENSXMAG00000008629 Xiphophorus maculatus ENSXMAG00000008629 I 0.914
MNT Taeniopygia guttata ENSTGUG00000008774 I 0.914
Brh_R005672 Buceros rhinoceros Brh_R005672 I 0.914
ENSAMXG00000008763 Astyanax mexicanus ENSAMXG00000008763 I 0.914
ENSONIG00000008133 Oreochromis niloticus ENSONIG00000008133 I 0.914
Ogr16275 Ophisaurus gracilis Ogr16275 I 0.914
mnt.L Xenopus laevis XB-GENE-6087152 I 0.914
Pvit_02549 Pogona vitticeps Pvit_02549 I 0.914
Afo_R013625 Aptenodytes forsteri Afo_R013625 I 0.914
ENSAPLG00000003927 Anas platyrhynchos ENSAPLG00000003927 I 0.914
Aan_R004293 Calypte anna Aan_R004293 I 0.914
ENSXMAG00000011266 Xiphophorus maculatus ENSXMAG00000011266 I 0.912
mntb Danio rerio ENSDARG00000073988 I 0.912
ENSPFOG00000010412 Poecilia formosa ENSPFOG00000010412 I 0.912
ENSONIG00000008731 Oreochromis niloticus ENSONIG00000008731 I 0.912
mntb Oryzias latipes ENSORLG00000002734 I 0.912
mntb Takifugu rubripes ENSTRUG00000011273 I 0.912
mntb Gasterosteus aculeatus ENSGACG00000020487 I 0.912
ENSAMXG00000020050 Astyanax mexicanus ENSAMXG00000020050 I 0.912
MNT Oryzias latipes ENSORLG00000007865 I 0.912
MNT Procavia capensis ENSPCAG00000013160 I 0.893
ENSPANG00000024466 Papio anubis ENSPANG00000024466 I 0.893
ENSSTOG00000026802 Ictidomys tridecemlineatus ENSSTOG00000026802 I 0.893
ENSP00000384177-D1 Bos grunniens ENSP00000384177-D1 I 0.893
Mnt Rattus norvegicus ENSRNOG00000002894 I 0.893
ENSPVAG00000002166 Pteropus vampyrus ENSPVAG00000002166 I 0.893
MNT Pan troglodytes ENSPTRG00000008549 I 0.893
MNT Oryctolagus cuniculus ENSOCUG00000016100 I 0.893
ENSCSAG00000013771 Chlorocebus sabaeus ENSCSAG00000013771 I 0.893
MNT Dasypus novemcinctus ENSDNOG00000040019 I 0.893
MNT Felis catus ENSFCAG00000006315 I 0.893
MNT Otolemur garnettii ENSOGAG00000004499 I 0.893
MNT Callithrix jacchus ENSCJAG00000012389 I 0.893
ENSAMEG00000007541 Ailuropoda melanoleuca ENSAMEG00000007541 I 0.893
MNT Bos taurus ENSBTAG00000025129 I 0.893
MNT Canis familiaris ENSCAFG00000019295 I 0.893
MNT Homo sapiens ENSG00000070444 D 0.893
ENSCPOG00000014839 Cavia porcellus ENSCPOG00000014839 I 0.893
ENSOARG00000015698 Ovis aries ENSOARG00000015698 I 0.893
Mnt Mus musculus ENSMUSG00000000282 D 0.893
MNT Macaca mulatta ENSMMUG00000022004 I 0.893
MNT Gorilla gorilla ENSGGOG00000002455 I 0.893
ENSMPUG00000012867 Mustela putorius furo ENSMPUG00000012867 I 0.893
ENSGMOG00000006979 Gadus morhua ENSGMOG00000006979 I 0.891
MNT Tetraodon nigroviridis ENSTNIG00000005816 I 0.886
MNT Takifugu rubripes ENSTRUG00000015800 I 0.886
SMAR003191 Strigamia maritima SMAR003191 I 0.884
ENSLOCG00000004411 Lepisosteus oculatus ENSLOCG00000004411 I 0.884
LDEC010970 Leptinotarsa decemlineata LDEC010970 I 0.882
TC015361 Tribolium castaneum TC015361 I 0.882
Sakowv30028253m.g Saccoglossus kowalevskii Sakowv30028253m.g I 0.860
YQE_11244 Dendroctonus ponderosae YQE_11244 N 0.858
ENSSHAG00000011999 Sarcophilus harrisii ENSSHAG00000011999 N 0.858
CPIJ015473 Culex quinquefasciatus CPIJ015473 I 0.849
AAEL006567 Aedes aegypti AAEL006567 I 0.849
CpipJ_CPIJ015473 Culex pipiens CpipJ_CPIJ015473 I 0.849
HMEL003564 Heliconius melpomene HMEL003564 N 0.846
BGIBMGA013173 Bombyx mori BGIBMGA013173 N 0.846
MCINX010388 Melitaea cinxia MCINX010388 N 0.846
ACYPI007295 Acyrthosiphon pisum ACYPI007295 N 0.846
L798_06616 Zootermopsis nevadensis L798_06616 N 0.845