Myotis_brandtii_ASCL1_10010089 (Myotis brandtii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Myotis_brandtii_ASCL1_10010089 T047423_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ASCL1
M04135_2.00
Homo sapiens
NRCASSTGYN

NRCASSTGYN
SELEX
Yin et al.(2017)
ASCL1_eDBD_HT-SELEX
0.459 1.000
ASCL1
M08055_2.00
Homo sapiens
NNRGCAGCTGSNN

NNSCAGCTGCYNN
ChIP-seq
Mathelier et al.(2014)
MA1100.1
0.459 1.000
ASCL1
M08730_2.00
Homo sapiens
NNVCASCTGCYBYN

NRVRGCAGSTGBNN
Misc
Kulakovskiy et al.(2013)
ASCL1_HUMAN.H11MO.0.A
0.459 1.000
Ascl1
M08748_2.00
Mus musculus
BHSCASCTGCYBBN

NVVRGCAGSTGSDV
Misc
Kulakovskiy et al.(2013)
ASCL1_MOUSE.H11MO.0.A
0.459 1.000
Ascl1
M09464_2.00
Mus musculus
NVCABCTGBBNN

NNVVCAGVTGBN
Misc
Heinz et al.(2010)
NeuralTubes-Ascl1_GSE55840
0.459 1.000
ASCL1
M09855_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MASH1_Q6_01
0.459 1.000
ASCL1
M09856_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MASH1_Q6_02
0.459 1.000
ASCL1
M09857_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MASH1_Q6
0.459 1.000
ASCL1
M04136_2.00
Homo sapiens
NRCAGCTGYN

NRCAGCTGYN
SELEX
Yin et al.(2017)
ASCL1_eDBD_Methyl-HT-SELEX
0.459 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_ASCL1_10010089 bHLH 1 18

Links

Other bHLH family TFs
Other Myotis brandtii TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ogr16040 Ophisaurus gracilis Ogr16040 I 0.914
ENSPFOG00000020633 Poecilia formosa ENSPFOG00000020633 I 0.459
ascl1b Tetraodon nigroviridis ENSTNIG00000011380 I 0.459
ENSXMAG00000019890 Xiphophorus maculatus ENSXMAG00000019890 I 0.459
ascl1b Oryzias latipes ENSORLG00000012117 I 0.459
ascl1b Takifugu rubripes ENSTRUG00000011651 I 0.459
ENSONIG00000020440 Oreochromis niloticus ENSONIG00000020440 I 0.459
ascl1b Danio rerio ENSDARG00000101628 I 0.459
ascl1b Gasterosteus aculeatus ENSGACG00000011375 I 0.459
ENSGMOG00000009589 Gadus morhua ENSGMOG00000009589 I 0.459
ENSLOCG00000017318 Lepisosteus oculatus ENSLOCG00000017318 I 0.459
ENSAMXG00000024858 Astyanax mexicanus ENSAMXG00000024858 I 0.459