Pm008898 (Prunus mume)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pm008898 T047610_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRM
M09784_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ICE1_01 		0.870 0.673
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm008898 bHLH 49 97

Links

Other bHLH family TFs
Other Prunus mume TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa010972mg Prunus persica PRUPE_ppa010972mg I 0.914
PK06841.1 Cannabis sativa PK06841.1 I 0.894
Cla016068 Citrullus lanatus Cla016068 I 0.890
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.890
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.890
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.890
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.890
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.890
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.890
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.890
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.887
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.887
GLYMA09G06770 Glycine max GLYMA09G06770 I 0.884
MDP0000318229 Malus domestica MDP0000318229 I 0.884
MDP0000133262 Malus domestica MDP0000133262 I 0.884
Solyc07g018010.2 Solanum lycopersicum Solyc07g018010.2 I 0.884
orange1.1g025665m.g Citrus sinensis orange1.1g025665m.g I 0.884
GLYMA15G18070 Glycine max GLYMA15G18070 I 0.884
SapurV1A.0140s0210 Salix purpurea SapurV1A.0140s0210 I 0.884
PGSC0003DMG400004087 Solanum tuberosum PGSC0003DMG400004087 I 0.884
TCM_039471 Theobroma cacao TCM_039471 I 0.884
POPTR_0018s13860 Populus trichocarpa POPTR_0018s13860 I 0.884
VIT_11s0052g00100 Vitis vinifera VIT_11s0052g00100 I 0.884
gene17273-v1.0-hybrid Fragaria vesca gene17273-v1.0-hybrid I 0.884
Aquca_018_00039 Aquilegia coerulea Aquca_018_00039 I 0.884
Ciclev10009285m.g Citrus clementina Ciclev10009285m.g I 0.884
Eucgr.C02208 Eucalyptus grandis Eucgr.C02208 I 0.884
Gorai.013G242800 Gossypium raimondii Gorai.013G242800 I 0.884
MTR_2g038040 Medicago truncatula MTR_2g038040 I 0.884
Lus10006951.g Linum usitatissimum Lus10006951.g I 0.884
cassava2997.m1 Manihot esculenta cassava2997.m1 I 0.884
30198.m000869 Ricinus communis 30198.m000869 I 0.884
TCM_006602 Theobroma cacao TCM_006602 I 0.877
PGSC0003DMG400008195 Solanum tuberosum PGSC0003DMG400008195 I 0.877
PK03241.1 Cannabis sativa PK03241.1 I 0.877
Gorai.008G036900 Gossypium raimondii Gorai.008G036900 I 0.877
Solyc08g062780.1 Solanum lycopersicum Solyc08g062780.1 I 0.877
ONIVA01G07150 Oryza nivara ONIVA01G07150 N 0.876
BGIOSGA015389 Oryza indica BGIOSGA015389 N 0.876
Bra032947 Brassica rapa Bra032947 I 0.870
Bra025226 Brassica rapa Bra025226 I 0.870
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.870
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.870
Bra034246 Brassica rapa Bra034246 I 0.870
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.870
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.870
Bra019794 Brassica rapa Bra019794 I 0.870
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.870
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.870
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.870
Bo9g008020 Brassica oleracea Bo9g008020 I 0.870
mgf016462m Mimulus guttatus mgf016462m I 0.870
Bra016749 Brassica rapa Bra016749 I 0.870
mgf012194m Mimulus guttatus mgf012194m I 0.870
mgf015974m Mimulus guttatus mgf015974m I 0.870
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.870
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.870
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.870
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.870
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.870
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.870
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.870
TCM_014741 Theobroma cacao TCM_014741 I 0.870
TCM_017336 Theobroma cacao TCM_017336 I 0.870
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.870
F775_14780 Aegilops tauschii F775_14780 I 0.870
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.870
Pm024587 Prunus mume Pm024587 I 0.870
30147.m014419 Ricinus communis 30147.m014419 I 0.870
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.870
Pm016093 Prunus mume Pm016093 I 0.870
Cla003283 Citrullus lanatus Cla003283 I 0.870
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.870
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.870
Cla002682 Citrullus lanatus Cla002682 I 0.870
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.870
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.870
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.870
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.870
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.870
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.870
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.870
MDP0000662999 Malus domestica MDP0000662999 I 0.870
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.870
SCRM2 Arabidopsis thaliana AT1G12860 I 0.870
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.870
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.870
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I 0.870
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.870
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.870
PK06940.1 Cannabis sativa PK06940.1 I 0.870
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.870
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.870
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.870
SCRM Arabidopsis thaliana AT3G26744 D 0.870
MDP0000304669 Malus domestica MDP0000304669 I 0.870
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.870
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.870
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.870
Bo7g083870 Brassica oleracea Bo7g083870 I 0.870
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.870
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.870
Bo8g065080 Brassica oleracea Bo8g065080 I 0.870
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.870
Bo5g016510 Brassica oleracea Bo5g016510 I 0.870
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.870
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.870
MDP0000247912 Malus domestica MDP0000247912 I 0.870
Bo00285s440 Brassica oleracea Bo00285s440 I 0.870
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.870
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.870
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.870
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.870
Ca_01394 Cicer arietinum Ca_01394 I 0.870
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.870
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.870
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.870
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.870
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.870
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.870
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.870
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.870
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.870
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.870
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.870
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.870
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.870
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.870
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.870
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.870
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.870
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.870
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.870
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.870
OS01G0928000 Oryza sativa OS01G0928000 I 0.870
OS11G0523700 Oryza sativa OS11G0523700 I 0.870
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.870
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.870
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.870
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.870
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.870
Si026212m.g Setaria italica Si026212m.g I 0.870
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.870
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.870
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.870
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.870
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.870
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.870
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.870
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.870
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.870
OBART11G15260 Oryza barthii OBART11G15260 I 0.870
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.870
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.870
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.870
OBART01G42600 Oryza barthii OBART01G42600 I 0.870
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.870
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.870
Si001874m.g Setaria italica Si001874m.g I 0.870
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.870
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.870
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.867
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.867
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.867
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.867
GLYMA13G00480 Glycine max GLYMA13G00480 I 0.864
GLYMA17G06610 Glycine max GLYMA17G06610 I 0.864
PGSC0003DMG400017440 Solanum tuberosum PGSC0003DMG400017440 I 0.863
Solyc05g014590.2 Solanum lycopersicum Solyc05g014590.2 I 0.863
Cucsa.282100 Cucumis sativus Cucsa.282100 N 0.860
Si019518m.g Setaria italica Si019518m.g I 0.860
Cla019147 Citrullus lanatus Cla019147 N 0.860
GSMUA_Achr11G09640_001 Musa acuminata GSMUA_Achr11G09640_001 I 0.859
Pavir.Ha01426 Panicum virgatum Pavir.Ha01426 I 0.859
MTR_7g083900 Medicago truncatula MTR_7g083900 I 0.859
Ca_23892 Cicer arietinum Ca_23892 I 0.859
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.857
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.857
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.857
mgf019723m Mimulus guttatus mgf019723m I 0.857
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.857
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.857
Traes_2AL_411B944D6 Triticum aestivum Traes_2AL_411B944D6 N 0.857
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.857
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.854
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.854
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.854
OGLUM04G06590 Oryza glumaepatula OGLUM04G06590 N 0.852
OBART04G06800 Oryza barthii OBART04G06800 N 0.852
OMERI03G04040 Oryza meridionalis OMERI03G04040 N 0.852
ORGLA04G0051300 Oryza glaberrima ORGLA04G0051300 N 0.852
OPUNC04G05620 Oryza punctata OPUNC04G05620 N 0.852
ORUFI04G07840 Oryza rufipogon ORUFI04G07840 N 0.852
OS04G0300600 Oryza sativa OS04G0300600 N 0.852
cassava2552.valid.m1 Manihot esculenta cassava2552.valid.m1 I 0.851
cassava2551.valid.m1 Manihot esculenta cassava2551.valid.m1 I 0.851
AMTR_s00096p00160080 Amborella trichopoda AMTR_s00096p00160080 I 0.849
POPTR_0006s07440 Populus trichocarpa POPTR_0006s07440 N 0.849
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.847
Pm020879 Prunus mume Pm020879 I 0.847
MDP0000219146 Malus domestica MDP0000219146 I 0.846
gw1.257.54.1 Physcomitrella patens gw1.257.54.1 I 0.846
SCRM2 Arabidopsis lyrata Al_scaffold_0001_1326 I 0.843
Si006199m.g Setaria italica Si006199m.g I 0.843
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I 0.840
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.840
Solyc06g068870.2 Solanum lycopersicum Solyc06g068870.2 I 0.840
PGSC0003DMG401028788 Solanum tuberosum PGSC0003DMG401028788 I 0.840
F775_15875 Aegilops tauschii F775_15875 I 0.840
mgf024029m Mimulus guttatus mgf024029m I 0.840
TRIUR3_16046 Triticum urartu TRIUR3_16046 I 0.840
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.840
Traes_4DS_7B0E8D459 Triticum aestivum Traes_4DS_7B0E8D459 I 0.840
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.840
Lus10043199.g Linum usitatissimum Lus10043199.g I 0.840
BRADI4G17460 Brachypodium distachyon BRADI4G17460 I 0.840
Lus10032542.g Linum usitatissimum Lus10032542.g I 0.840
Cla023112 Citrullus lanatus Cla023112 I 0.840
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I 0.840
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.840
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.840
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.840
Cucsa.088960 Cucumis sativus Cucsa.088960 I 0.840
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.840
evm.TU.supercontig_115.71 Carica papaya evm.TU.supercontig_115.71 N 0.840
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.840