Pm016406 (Prunus mume)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pm016406 T047624_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.861 0.816
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm016406 bHLH 296 344

Links

Other bHLH family TFs
Other Prunus mume TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa006134mg Prunus persica PRUPE_ppa006134mg I 0.914
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.901
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.901
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.901
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.875
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.875
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.875
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.875
30152.m002405 Ricinus communis 30152.m002405 I 0.875
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.875
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.873
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.873
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.873
29216.m000261 Ricinus communis 29216.m000261 I 0.873
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.873
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.873
TCM_024842 Theobroma cacao TCM_024842 I 0.873
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.873
mgf016734m Mimulus guttatus mgf016734m I 0.873
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.873
Pm025821 Prunus mume Pm025821 I 0.873
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.873
Cla017792 Citrullus lanatus Cla017792 I 0.873
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.873
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.873
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.873
Pm000447 Prunus mume Pm000447 I 0.873
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.873
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.873
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.873
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.873
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.873
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.873
MDP0000180376 Malus domestica MDP0000180376 I 0.873
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.873
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.873
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.873
PK18038.1 Cannabis sativa PK18038.1 I 0.873
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.873
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.873
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.873
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.873
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.873
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.873
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.873
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.873
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.873
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I 0.863
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.862
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.862
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.861
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.861
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.861
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.861
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.861
F775_24151 Aegilops tauschii F775_24151 I 0.861
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.861
OBART08G19860 Oryza barthii OBART08G19860 I 0.861
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.861
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.861
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.861
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.861
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.861
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.861
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.861
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.861
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.861
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.861
OB08G26810 Oryza brachyantha OB08G26810 I 0.861
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.861
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.861
OBART09G14660 Oryza barthii OBART09G14660 I 0.861
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.861
OS09G0487900 Oryza sativa OS09G0487900 I 0.861
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.861
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.861
OS08G0506700 Oryza sativa OS08G0506700 D 0.861
MDP0000214472 Malus domestica MDP0000214472 N 0.860
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.860
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.858
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.858
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.853
TCM_005925 Theobroma cacao TCM_005925 I 0.853
GLYMA19G32600 Glycine max GLYMA19G32600 I 0.851
MTR_4g033295 Medicago truncatula MTR_4g033295 I 0.846
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.845
OBART02G23210 Oryza barthii OBART02G23210 I 0.845
OB02G30670 Oryza brachyantha OB02G30670 I 0.845
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.845
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I 0.845
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.845
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.845
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.845
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.845
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.845
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.845
Si010513m.g Setaria italica Si010513m.g I 0.845
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.845
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.845
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.845
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.845
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.845
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.845
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.845
GLYMA02G29830 Glycine max GLYMA02G29830 I 0.842
Bo4g194080 Brassica oleracea Bo4g194080 N 0.840
Bra037732 Brassica rapa Bra037732 N 0.840
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.838