Pm018355 (Prunus mume)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pm018355 T047626_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS01G0235700
M09894_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.914 0.938
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.890 0.958
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN

NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.890 0.938
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK

MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.890 0.938
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN

NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.890 0.917
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.890 0.896
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN

NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.882 0.625
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV

BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.879 0.917
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM

KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.843 0.500
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV

BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.840 0.625
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm018355 bHLH 450 497

Links

Other bHLH family TFs
Other Prunus mume TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_26964 Aegilops tauschii F775_26964 N 0.000
F775_29256 Aegilops tauschii F775_29256 I 0.000
F775_24687 Aegilops tauschii F775_24687 I 0.000
F775_16032 Aegilops tauschii F775_16032 I 0.000
Aquca_014_00944 Aquilegia coerulea Aquca_014_00944 I 0.000
ANAC087 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001462 I 0.000
ANAC087 Arabidopsis thaliana AT5G18270 D 0.000
Bostr.26527s0381 Boechera stricta Bostr.26527s0381 I 0.000
BRADI1G63630 Brachypodium distachyon BRADI1G63630 I 0.000
Bo3g013050 Brassica oleracea Bo3g013050 I 0.000
Bo2g015440 Brassica oleracea Bo2g015440 I 0.000
Bra006449 Brassica rapa Bra006449 I 0.000
Bra023669 Brassica rapa Bra023669 I 0.000
Cagra.0906s0022 Capsella grandiflora Cagra.0906s0022 I 0.000
Carubv10001373m.g Capsella rubella Carubv10001373m.g I 0.000
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I 0.000
Ca_08255 Cicer arietinum Ca_08255 I 0.000
Cla012339 Citrullus lanatus Cla012339 I 0.000
Cucsa.002980 Cucumis sativus Cucsa.002980 I 0.000
Eucgr.A02074 Eucalyptus grandis Eucgr.A02074 I 0.000
Thhalv10014060m.g Eutrema salsugineum Thhalv10014060m.g I 0.000
gene20686-v1.0-hybrid Fragaria vesca gene20686-v1.0-hybrid I 0.000
GLYMA19G28515 Glycine max GLYMA19G28515 I 0.000
GLYMA16G26810 Glycine max GLYMA16G26810 I 0.000
GLYMA02G07760 Glycine max GLYMA02G07760 I 0.000
GLYMA16G04720 Glycine max GLYMA16G04720 I 0.000
Gorai.007G267700 Gossypium raimondii Gorai.007G267700 I 0.000
Gorai.013G118000 Gossypium raimondii Gorai.013G118000 I 0.000
MLOC_5832 Hordeum vulgare MLOC_5832 N 0.000
MLOC_64057 Hordeum vulgare MLOC_64057 N 0.000
MLOC_72737 Hordeum vulgare MLOC_72737 I 0.000
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I 0.000
cassava25877.m1 Manihot esculenta cassava25877.m1 I 0.000
GSMUA_Achr6G32290_001 Musa acuminata GSMUA_Achr6G32290_001 I 0.000
GSMUA_Achr9G16920_001 Musa acuminata GSMUA_Achr9G16920_001 I 0.000
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I 0.000
GSMUA_Achr7G18330_001 Musa acuminata GSMUA_Achr7G18330_001 I 0.000
GSMUA_Achr6G08600_001 Musa acuminata GSMUA_Achr6G08600_001 I 0.000
GSMUA_Achr5G07600_001 Musa acuminata GSMUA_Achr5G07600_001 I 0.000
GSMUA_Achr3G09520_001 Musa acuminata GSMUA_Achr3G09520_001 I 0.000
OBART11G01610 Oryza barthii OBART11G01610 N 0.000
OGLUM11G01340 Oryza glumaepatula OGLUM11G01340 N 0.000
BGIOSGA034716 Oryza indica BGIOSGA034716 N 0.000
OPUNC11G01340 Oryza punctata OPUNC11G01340 N 0.000
OS11G0127600 Oryza sativa OS11G0127600 N 0.000
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I 0.000
Pavir.Bb02033 Panicum virgatum Pavir.Bb02033 I 0.000
Pavir.J21394 Panicum virgatum Pavir.J21394 I 0.000
Pavir.J13094 Panicum virgatum Pavir.J13094 I 0.000
POPTR_0019s04710 Populus trichocarpa POPTR_0019s04710 I 0.000
Pm025307 Prunus mume Pm025307 I 0.000
PRUPE_ppa005770mg Prunus persica PRUPE_ppa005770mg I 0.000
29950.m001171 Ricinus communis 29950.m001171 I 0.000
SapurV1A.0308s0280 Salix purpurea SapurV1A.0308s0280 I 0.000
SapurV1A.2283s0010 Salix purpurea SapurV1A.2283s0010 I 0.000
Si010417m.g Setaria italica Si010417m.g N 0.000
Sb01g036590 Sorghum bicolor Sb01g036590 I 0.000
Sb05g001590 Sorghum bicolor Sb05g001590 N 0.000
TCM_026028 Theobroma cacao TCM_026028 I 0.000
Traes_4AS_B95A1C3A1 Triticum aestivum Traes_4AS_B95A1C3A1 I 0.000
Traes_3DS_930F3B5AD Triticum aestivum Traes_3DS_930F3B5AD I 0.000
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I 0.000
Traes_4BL_B92B51F5D Triticum aestivum Traes_4BL_B92B51F5D I 0.000
Traes_4DL_D84567626 Triticum aestivum Traes_4DL_D84567626 I 0.000
Traes_5AL_373E730BB Triticum aestivum Traes_5AL_373E730BB I 0.000
Traes_5BL_420974D47 Triticum aestivum Traes_5BL_420974D47 N 0.000
Traes_3AS_4220612F3 Triticum aestivum Traes_3AS_4220612F3 I 0.000
TRIUR3_35152 Triticum urartu TRIUR3_35152 I 0.000
TRIUR3_23644 Triticum urartu TRIUR3_23644 I 0.000
TRIUR3_14541 Triticum urartu TRIUR3_14541 N 0.000
VIT_08s0007g07640 Vitis vinifera VIT_08s0007g07640 I 0.000
GRMZM2G018436 Zea mays GRMZM2G018436 N 0.000
GRMZM6G257110 Zea mays GRMZM6G257110 N 0.000
GRMZM2G159500 Zea mays GRMZM2G159500 I 0.000