CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm023738
(
Prunus mume
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pm023738
T047648_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH28
M06742_2.00
Arabidopsis thaliana
NNNYGTACGGAH
DTCCGTACRNNN
Dap-seq
OMalley et al.(2016)
bHLH28_col_a
0.856
0.816
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm023738
bHLH
303
351
LSNHVEAERQRREKLNHRFYVLRSVVPNVSKMDKSSLLADAVSYINQLK
Links
Other
bHLH
family TFs
Other
Prunus mume
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy