Pvit_18605 (Pogona vitticeps)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pvit_18605 T047772_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Srebf2
M01725_2.00
Mus musculus
TSRCGTGA

TCACGYSA
PBM
Weirauch et al.(2014)
pTH4327
0.914 1.000
SREBF2
M02811_2.00
Homo sapiens
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2013)
SREBF2_1
0.914 1.000
SREBF2
M03591_2.00
Homo sapiens
NRTCACVCCAYH

DRTGGBGTGAYN
SELEX
Nitta et al.(2015)
SREBF2_1
0.914 1.000
SREBF2
M04219_2.00
Homo sapiens
RTCACGCCAY

RTGGCGTGAY
SELEX
Yin et al.(2017)
SREBF2_eDBD_HT-SELEX_1
0.914 1.000
SREBF2
M04220_2.00
Homo sapiens
ATCACGTGAY

RTCACGTGAT
SELEX
Yin et al.(2017)
SREBF2_eDBD_HT-SELEX_2
0.914 1.000
SREBF2
M08059_2.00
Homo sapiens
RTCACVCCAB

VTGGBGTGAY
ChIP-seq
Mathelier et al.(2014)
MA0596.1
0.914 1.000
SREBF2
M08741_2.00
Homo sapiens
NNYCWSBCCABBB

VVVTGGVSWGRNN
Misc
Kulakovskiy et al.(2013)
SRBP2_HUMAN.H11MO.0.B
0.914 1.000
Srebf2
M08752_2.00
Mus musculus
NNYCWSBCCABBB

VVVTGGVSWGRNN
Misc
Kulakovskiy et al.(2013)
SRBP2_MOUSE.H11MO.0.B
0.914 1.000
SREBF2
M09462_2.00
Homo sapiens
MNRTCACVCCAC

GTGGBGTGAYNK
Misc
Heinz et al.(2010)
HepG2-Srebp2_GSE31477
0.914 1.000
SREBF2
M09882_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP2_Q6_01
0.914 1.000
SREBF2
M09883_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP2_Q6
0.914 1.000
SREBF2
M04221_2.00
Homo sapiens
RTCACVCCAY

RTGGBGTGAY
SELEX
Yin et al.(2017)
SREBF2_eDBD_Methyl-HT-SELEX_1
0.914 1.000
SREBF2
M04222_2.00
Homo sapiens
RTCACSTGAY

RTCASGTGAY
SELEX
Yin et al.(2017)
SREBF2_eDBD_Methyl-HT-SELEX_2
0.914 1.000
SREBF1
M04062_2.00
Homo sapiens
VHCACVCSAY

RTSGBGTGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1
0.862 0.804
SREBF1
M04063_2.00
Homo sapiens
VHCRCGYGDB

VHCRCGYGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2
0.862 0.804
SREBF1
M08048_2.00
Homo sapiens
VTCACSCCAY

RTGGSGTGAB
ChIP-seq
Mathelier et al.(2014)
MA0595.1
0.862 0.804
SREBF1
M08711_2.00
Homo sapiens
VTCACVYSAYH

DRTSRBGTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A
0.862 0.804
SREBF1
M09796_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBF1_02
0.862 0.804
SREBF1
M09797_2.00
Homo sapiens
NATCACGTGAB

VTCACGTGATN
Transfac
Matys et al.(2006)
V$SREBP1_01
0.862 0.804
SREBF1
M09798_2.00
Homo sapiens
KRTCACCCCAC

GTGGGGTGAYM
Transfac
Matys et al.(2006)
V$SREBP1_02
0.862 0.804
SREBF1
M09799_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q5
0.862 0.804
SREBF1
M09800_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6_01
0.862 0.804
SREBF1
M09801_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6
0.862 0.804
SREBF1
M04064_2.00
Homo sapiens
MTCACVCCAY

RTGGBGTGAK
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1
0.862 0.804
SREBF1
M04065_2.00
Homo sapiens
RTCACCTGAY

RTCAGGTGAY
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2
0.862 0.804
Srebf1
M00754_2.00
Mus musculus
VWCAYVYSAB

VTSRBRTGWB
PBM
Weirauch et al.(2013)
pTH0914
0.862 0.784
Srebf1
M01724_2.00
Mus musculus
RWCAYVYBD

HVRBRTGWY
PBM
Weirauch et al.(2014)
pTH5161
0.862 0.784
Srebf1
M02816_2.00
Mus musculus
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2013)
Srebf1_1
0.862 0.784
Srebf1
M08749_2.00
Mus musculus
VTCASSYSABN

NVTSRSSTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B
0.862 0.784
HLH106
M03626_2.00
Drosophila melanogaster
RTCACGTGAY

RTCACGTGAY
SELEX
Nitta et al.(2015)
HLH106_1
0.838 0.647
HLH106
M03627_2.00
Drosophila melanogaster
NRTCACGCCAYH

DRTGGCGTGAYN
SELEX
Nitta et al.(2015)
HLH106_2
0.838 0.647
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_18605 bHLH 280 330

Links

Other bHLH family TFs
Other Pogona vitticeps TFs

Invalid Input OrderBy

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action