29900.m001610 (Ricinus communis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 29900.m001610 T047879_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.860 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29900.m001610 bHLH 37 85

Links

Other bHLH family TFs
Other Ricinus communis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.890
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.890
TCM_029711 Theobroma cacao TCM_029711 I 0.888
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.888
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.888
MDP0000249969 Malus domestica MDP0000249969 I 0.869
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.864
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.864
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.864
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.864
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.864
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.864
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.864
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.864
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.860
PK20225.1 Cannabis sativa PK20225.1 D 0.860
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.860
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.860
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.860
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.860
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.859
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.858
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.852
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.852
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.852
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.852
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.852
OB01G17480 Oryza brachyantha OB01G17480 I 0.852
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.852
OS01G0218100 Oryza sativa OS01G0218100 I 0.852
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.852
Si002517m.g Setaria italica Si002517m.g I 0.851
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.849
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.849
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.846
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.846
Cla019977 Citrullus lanatus Cla019977 I 0.846
mgf022146m Mimulus guttatus mgf022146m N 0.844
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.843
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.843
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N 0.842
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N 0.842
MDP0000256492 Malus domestica MDP0000256492 N 0.842
Ca_06386 Cicer arietinum Ca_06386 I 0.840
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.840
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.840