30131.m006993 (Ricinus communis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 30131.m006993 T047900_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SCRM
M09784_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.879 0.979
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30131.m006993 bHLH 240 287

Links

Other bHLH family TFs
Other Ricinus communis TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava7475.valid.m1 Manihot esculenta cassava7475.valid.m1 I 0.914
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.879
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.879
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.879
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.879
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.879
Si001874m.g Setaria italica Si001874m.g I 0.879
Si026212m.g Setaria italica Si026212m.g I 0.879
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.879
TCM_017336 Theobroma cacao TCM_017336 I 0.879
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.879
Cla003283 Citrullus lanatus Cla003283 I 0.879
Pm016093 Prunus mume Pm016093 I 0.879
Pm024587 Prunus mume Pm024587 I 0.879
Cla002682 Citrullus lanatus Cla002682 I 0.879
Ca_01394 Cicer arietinum Ca_01394 I 0.879
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.879
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.879
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.879
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.879
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.879
OS01G0928000 Oryza sativa OS01G0928000 I 0.879
OS11G0523700 Oryza sativa OS11G0523700 I 0.879
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.879
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.879
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.879
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.879
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.879
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.879
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.879
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.879
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.879
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.879
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.879
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.879
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.879
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.879
30147.m014419 Ricinus communis 30147.m014419 I 0.879
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.879
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.879
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.879
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.879
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.879
MDP0000662999 Malus domestica MDP0000662999 I 0.879
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.879
MDP0000247912 Malus domestica MDP0000247912 I 0.879
MDP0000304669 Malus domestica MDP0000304669 I 0.879
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.879
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.879
PK06940.1 Cannabis sativa PK06940.1 I 0.879
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I 0.879
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.879
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.879
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.879
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.879
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.879
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.879
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.879
mgf012194m Mimulus guttatus mgf012194m I 0.879
mgf015974m Mimulus guttatus mgf015974m I 0.879
mgf016462m Mimulus guttatus mgf016462m I 0.879
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.879
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.879
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.879
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.879
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.879
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.879
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.879
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.879
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.879
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.879
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.879
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.879
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.879
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.879
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.879
TCM_014741 Theobroma cacao TCM_014741 I 0.879
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.879
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.879
Bo7g083870 Brassica oleracea Bo7g083870 I 0.879
Bo8g065080 Brassica oleracea Bo8g065080 I 0.879
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.879
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.879
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.879
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.879
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.879
Bo00285s440 Brassica oleracea Bo00285s440 I 0.879
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.879
Bo5g016510 Brassica oleracea Bo5g016510 I 0.879
Bo9g008020 Brassica oleracea Bo9g008020 I 0.879
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.879
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.879
Bra019794 Brassica rapa Bra019794 I 0.879
Bra025226 Brassica rapa Bra025226 I 0.879
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.879
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.879
Bra016749 Brassica rapa Bra016749 I 0.879
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.879
Bra034246 Brassica rapa Bra034246 I 0.879
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.879
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.879
Bra032947 Brassica rapa Bra032947 I 0.879
OBART11G15260 Oryza barthii OBART11G15260 I 0.879
OBART01G42600 Oryza barthii OBART01G42600 I 0.879
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.879
F775_14780 Aegilops tauschii F775_14780 I 0.879
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.879
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.879
SCRM Arabidopsis thaliana AT3G26744 D 0.879
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.879
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.879
SCRM2 Arabidopsis thaliana AT1G12860 I 0.879
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.879
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.879
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.879
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.879
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.879
GSMUA_Achr11G09640_001 Musa acuminata GSMUA_Achr11G09640_001 I 0.868
MTR_7g083900 Medicago truncatula MTR_7g083900 I 0.868
Ca_23892 Cicer arietinum Ca_23892 I 0.868
Pavir.Ha01426 Panicum virgatum Pavir.Ha01426 I 0.868
ORUFI04G07840 Oryza rufipogon ORUFI04G07840 N 0.867
OS04G0300600 Oryza sativa OS04G0300600 N 0.867
OPUNC04G05620 Oryza punctata OPUNC04G05620 N 0.867
OBART04G06800 Oryza barthii OBART04G06800 N 0.867
BGIOSGA015389 Oryza indica BGIOSGA015389 N 0.867
OGLUM04G06590 Oryza glumaepatula OGLUM04G06590 N 0.867
ONIVA01G07150 Oryza nivara ONIVA01G07150 N 0.867
OMERI03G04040 Oryza meridionalis OMERI03G04040 N 0.867
ORGLA04G0051300 Oryza glaberrima ORGLA04G0051300 N 0.867
GSMUA_Achr3G00640_001 Musa acuminata GSMUA_Achr3G00640_001 N 0.865
29631.m001025 Ricinus communis 29631.m001025 N 0.862
fgenesh2_kg.6__1024__AT5G10570.1 Arabidopsis lyrata fgenesh2_kg.6__1024__AT5G10570.1 N 0.856
mgf017272m Mimulus guttatus mgf017272m N 0.856
gene26895-v1.0-hybrid Fragaria vesca gene26895-v1.0-hybrid N 0.856
gene05560-v1.0-hybrid Fragaria vesca gene05560-v1.0-hybrid N 0.856
Eucgr.F00459 Eucalyptus grandis Eucgr.F00459 N 0.856
Ciclev10001683m.g Citrus clementina Ciclev10001683m.g N 0.856
Carubv10026606m.g Capsella rubella Carubv10026606m.g N 0.856
Cagra.0917s0023 Capsella grandiflora Cagra.0917s0023 N 0.856
Bostr.13175s0042 Boechera stricta Bostr.13175s0042 N 0.856
Bostr.0568s0223 Boechera stricta Bostr.0568s0223 N 0.856
Eucgr.F02171 Eucalyptus grandis Eucgr.F02171 N 0.856
Ciclev10025967m.g Citrus clementina Ciclev10025967m.g N 0.856
BRADI1G30000 Brachypodium distachyon BRADI1G30000 N 0.856
Eucgr.I00608 Eucalyptus grandis Eucgr.I00608 N 0.856
MDP0000312274 Malus domestica MDP0000312274 N 0.856
SapurV1A.0004s0900 Salix purpurea SapurV1A.0004s0900 N 0.856
BGIOSGA023624 Oryza indica BGIOSGA023624 N 0.856
Pavir.J18000 Panicum virgatum Pavir.J18000 N 0.856
Bo3g097890 Brassica oleracea Bo3g097890 N 0.856
orange1.1g038389m.g Citrus sinensis orange1.1g038389m.g N 0.856
BHLH93 Arabidopsis thaliana AT5G65640 N 0.856
Thhalv10004732m.g Eutrema salsugineum Thhalv10004732m.g N 0.856
LjSGA_043777.1 Lotus japonicus LjSGA_043777.1 N 0.856
PDK_20s1771821g001 Phoenix dactylifera PDK_20s1771821g001 N 0.856
chr2.CM0177.460.nc Lotus japonicus chr2.CM0177.460.nc N 0.856
PK12634.1 Cannabis sativa PK12634.1 N 0.856
BHLH61 Arabidopsis thaliana AT5G10570 N 0.856
orange1.1g018897m.g Citrus sinensis orange1.1g018897m.g N 0.856
MDP0000644807 Malus domestica MDP0000644807 N 0.856
Gorai.009G226200 Gossypium raimondii Gorai.009G226200 N 0.856
Gorai.010G031800 Gossypium raimondii Gorai.010G031800 N 0.856
Gorai.007G229900 Gossypium raimondii Gorai.007G229900 N 0.856
Gorai.003G035900 Gossypium raimondii Gorai.003G035900 N 0.856
Gorai.002G137900 Gossypium raimondii Gorai.002G137900 N 0.856
Lus10002160.g Linum usitatissimum Lus10002160.g N 0.856
Lus10039631.g Linum usitatissimum Lus10039631.g N 0.856
bHLH093 Arabidopsis lyrata fgenesh2_kg.8__2611__AT5G65640.1 N 0.856
MDP0000603926 Malus domestica MDP0000603926 N 0.856
Bo9g171940 Brassica oleracea Bo9g171940 N 0.856
MDP0000178782 Malus domestica MDP0000178782 N 0.856
MDP0000175282 Malus domestica MDP0000175282 N 0.856
Bra024404 Brassica rapa Bra024404 N 0.856
GLYMA06G09670 Glycine max GLYMA06G09670 N 0.856
GLYMA01G02390 Glycine max GLYMA01G02390 N 0.856
OPUNC06G25390 Oryza punctata OPUNC06G25390 N 0.856
PGSC0003DMG400030616 Solanum tuberosum PGSC0003DMG400030616 N 0.856
GSMUA_Achr7G03930_001 Musa acuminata GSMUA_Achr7G03930_001 N 0.856
TCM_034574 Theobroma cacao TCM_034574 N 0.856
GSMUA_Achr1G26300_001 Musa acuminata GSMUA_Achr1G26300_001 N 0.856
Traes_7DL_67FF12B6A Triticum aestivum Traes_7DL_67FF12B6A N 0.856
Pm002283 Prunus mume Pm002283 N 0.856
Pm004330 Prunus mume Pm004330 N 0.856
VIT_18s0001g08040 Vitis vinifera VIT_18s0001g08040 N 0.856
VIT_17s0000g03550 Vitis vinifera VIT_17s0000g03550 N 0.856
VIT_00s1312g00010 Vitis vinifera VIT_00s1312g00010 N 0.856
GSMUA_Achr8G34120_001 Musa acuminata GSMUA_Achr8G34120_001 N 0.856
TCM_000915 Theobroma cacao TCM_000915 N 0.856
PRUPE_ppa016514mg Prunus persica PRUPE_ppa016514mg N 0.856
OBART06G27800 Oryza barthii OBART06G27800 N 0.856
PRUPE_ppa007656mg Prunus persica PRUPE_ppa007656mg N 0.856
OBART06G27860 Oryza barthii OBART06G27860 N 0.856
POPTR_0002s10910 Populus trichocarpa POPTR_0002s10910 N 0.856
Sb10g030470 Sorghum bicolor Sb10g030470 N 0.856
MTR_5g030770 Medicago truncatula MTR_5g030770 N 0.856
Solyc02g091690.2 Solanum lycopersicum Solyc02g091690.2 N 0.856
Solyc02g063430.2 Solanum lycopersicum Solyc02g063430.2 N 0.856
LPERR06G23280 Leersia perrieri LPERR06G23280 N 0.856
Si006877m.g Setaria italica Si006877m.g N 0.856
GRMZM2G128807 Zea mays GRMZM2G128807 N 0.856
Ca_11531 Cicer arietinum Ca_11531 N 0.856
ONIVA06G30800 Oryza nivara ONIVA06G30800 N 0.856
28179.m000457 Ricinus communis 28179.m000457 N 0.856
GLYMA08G37240 Glycine max GLYMA08G37240 N 0.856
cassava42105.valid.m1 Manihot esculenta cassava42105.valid.m1 N 0.856
PGSC0003DMG400006394 Solanum tuberosum PGSC0003DMG400006394 N 0.856
OGLUM06G29220 Oryza glumaepatula OGLUM06G29220 N 0.856
GLYMA04G09580 Glycine max GLYMA04G09580 N 0.856
mgf011848m Mimulus guttatus mgf011848m N 0.856
OMERI06G27810 Oryza meridionalis OMERI06G27810 N 0.856
ORUFI06G29810 Oryza rufipogon ORUFI06G29810 N 0.856
GLYMA09G33590 Glycine max GLYMA09G33590 N 0.856
Cucsa.103760 Cucumis sativus Cucsa.103760 N 0.856
cassava1707.valid.m1 Manihot esculenta cassava1707.valid.m1 N 0.856
29596.m000688 Ricinus communis 29596.m000688 N 0.856
cassava35909.valid.m1 Manihot esculenta cassava35909.valid.m1 N 0.856
cassava20174.m1 Manihot esculenta cassava20174.m1 N 0.856
PGSC0003DMG400010388 Solanum tuberosum PGSC0003DMG400010388 N 0.856
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.855
gw1.257.54.1 Physcomitrella patens gw1.257.54.1 I 0.855
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.855
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.855
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.855
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.855
MDP0000219146 Malus domestica MDP0000219146 I 0.855
PK06841.1 Cannabis sativa PK06841.1 I 0.855
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.855
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.852
SCRM2 Arabidopsis lyrata Al_scaffold_0001_1326 I 0.852
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.852
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.852
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.852
PGSC0003DMG401028788 Solanum tuberosum PGSC0003DMG401028788 I 0.849
Lus10032542.g Linum usitatissimum Lus10032542.g I 0.849
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.849
BRADI4G17460 Brachypodium distachyon BRADI4G17460 I 0.849
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.849
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.849
Lus10043199.g Linum usitatissimum Lus10043199.g I 0.849
Solyc06g068870.2 Solanum lycopersicum Solyc06g068870.2 I 0.849
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.842
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.842
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.842
mgf026193m Mimulus guttatus mgf026193m N 0.840
SapurV1A.0001s2810 Salix purpurea SapurV1A.0001s2810 N 0.840
POPTR_0006s07440 Populus trichocarpa POPTR_0006s07440 N 0.840
SapurV1A.0069s0030 Salix purpurea SapurV1A.0069s0030 N 0.839
POPTR_0010s05120 Populus trichocarpa POPTR_0010s05120 N 0.839
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.839
POPTR_0008s19390 Populus trichocarpa POPTR_0008s19390 N 0.839
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.839
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.839
Traes_3DL_4544FA87D Triticum aestivum Traes_3DL_4544FA87D I 0.469